Table 2 Picocyanobacterial reference genomes used for comparisons

From: Picocyanobacteria containing a novel pigment gene cluster dominate the brackish water Baltic Sea

Name

Abbreviation

Subcluster

Pigment type

Isolation source

Reference/institute

Synechococcus sp. WH 7803

WH7803

5.1

IIIa

Sargasso Sea

Dufresne et al. (2008)

Synechococcus sp. CC9605

CC9605

5.1

IIIc

California Current

Dufresne et al. (2008)

Synechococcus sp. WH 8102

WH8102

5.1

IIIc

Tropical Atlantic

Palenik et al. (2003)

Synechococcus sp. CC9311

CC9311

5.1

IIId

California Current

Palenik et al. (2006)

Synechococcus sp. CC9902

CC9902

5.1

IIId

California Current

Dufresne et al. (2008)

Synechococcus sp. RS9916

RS9916

5.1

IIId

Red Sea

Dufresne et al. (2008)

Synechococcus sp. BL107

BL107

5.1

IIId

Blanes Bay, Mediterranean Sea

Dufresne et al. (2008)

Synechococcus sp. WH 7805

WH7805

5.1

II

Sargasso Sea

Dufresne et al. (2008)

Synechococcus sp. RS9917

RS9917

5.1

I

Red Sea

Dufresne et al. (2008)

Synechococcus sp. WH 8016

WH8016

5.1

 

Woods Hole

JGI

Synechococcus sp. WH 8109

WH8109

5.1

 

Sargasso Sea

JCVI

Synechococcus sp. CC9616

CC9616

5.1

 

California Current

JGI

Synechococcus sp. RCC307

RCC307

5.3

IIIb

Mediterranean Sea

Dufresne et al. (2008)

Synechococcus sp. CB0205

CB0205

5.2

 

Chesapeake Bay

JCVI

Synechococcus sp. CB0101a

CB0101

5.2

 

Chesapeake Bay

JCVI

Synechococcus sp. WH 5701

WH5701

5.2

I

Long Island Sound

Dufresne et al. (2008)

Cyanobium gracile PCC 6307

PCC6307

5.2

I

Freshwater

Shih et al. (2013)

Cyanobium sp. PCC 7001

PCC7001

5.2

I

Long Island Sound

JCVI

  1. Abbreviations: JCVI, J Craig Venter Institute, USA; JGI, Joint Genome Institute, USA; PBS, phycobilisomes.
  2. aNot used for PBS analysis.
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