Figure 3
From: Discovery of anaerobic lithoheterotrophic haloarchaea, ubiquitous in hypersaline habitats
Maximum Likelihood phylogenetic tree of CISM catalytic subunits A. Totally 168 sequences were taken for the analysis. The tree with the highest log likelihood (-132625.7976) is shown. The bootstrap values (100 replicates) are shown next to the branches. All positions with less than 95% site coverage were eliminated. There were a total of 580 positions in the final dataset. The tree was constructed in MEGA6 (Tamura et al., 2013). CISM proteins of three sulfur-reducing haloarchaea Halanaeroarchaeum sulfurireducens HSR2T (HLASF) and Halodesulfurarchaeum formicicum strains HTSR1 and HSR6 are highlighted in bold (locus tag prefixes are HLASF, HTSR and HSR6, respectively). Sequential numeration of all HDA CISMs is used as in Table S10. Abbreviations used: Aro, arsenite oxidases family; Arr, arsenate reductase family; Nar/DMSO, nitrate/DMSO reductase family; Nas/Nap/Fdh, assimilatory (periplasmic) nitrate reductase/formate dehydrogenase family; Ttr, tetrathionate reductase family; Psr/Phs, polysulfide/thiosulfate reductase family; Unk, unknown family. Bar is 0.3 aminoacid substitutions per site.
