Figure 3
From: Regulatory (pan-)genome of an obligate intracellular pathogen in the PVC superphylum
Occupancy of the 10 conserved TFs on the W. chondrophila genome. (a–j) ChIP-Seq profiles of the 10 TFs. Black line on the graphs depicts the cutoff used to identify the total predicted targets of each TF, while the blue line denotes the median score used to select the predicted high confidence targets (blue) from the total predicted target sites (black). The coordinates below the graph (x axis) indicate the nucleotide (nt) position along the W. chondrophila genome and the y axis shows the relative abundance of the corresponding nt position in the precipitated sample. Owing to the poor quality of the DnaA1 and DnaA3 precipitates we elected not to predict targets.
