Abstract
Malignant rhabdoid tumor (MRT) is a highly malignant pediatric cancer, which arises in various sites such as the kidney, brain, and soft tissues. Cytogenetic studies have revealed alterations of 22q11 in MRT. Recently, deletions and mutations of the SNF5/INI1 locus in 22q11.2 have been reported in MRT, suggesting that SNF5/INI1 is a tumor suppressor gene for MRT. Here we report our molecular cytogenetic study for a newly established cell line from extrarenal MRT with t(1;22)(p36;q11.2). Consequently, the reciprocal translocation was associated with the interstitial deletion of a small segment including SNF5/INI1, and another, chromosome 22, showed terminal deletion, the breakpoint of which was located 70–80 kb centromeric to SNF5/INI1, resulting in homozygous deletion of SNF5/INI1 in this cell line.
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References
Ariyama Y, Sakabe T, Shinomiya T, Mori T, Fukuda Y, Inazawa J (1998) Identification of amplified DNA sequences on double minute chromosomes in a leukemic cell line KY821 by means of spectral karyotyping and comparative genomic hybridization. J Hum Genet 43:187–190
Biegel JA, Kalpana G, Knudsen ES, Packer RJ, Roberts CWM, Thiele CJ, Weissman B, Smith M (2002a) The role of INI1 and the SWI/SNF complex in the development of rhabdoid tumors: meeting summary from the workshop on childhood atypical teratoid/rhabdoid tumors. Cancer Res 62:323–328
Biegel JA, Tan L, Zhang F, Wainwright L, Russo P, Rorke LB (2002b) Alterations of the hSNF5/INI1 gene in central nervous system atypical teratoid/rhabdoid tumors and renal and extrarenal rhabdoid tumors. Clin Cancer Res 8:3461–3467
Parham DM, Weeks DA, Beckwith JB (1994) The clinicopathologic spectrum of putative extrarenal rhabdoid tumours. Am J Surg Pathol 18:1010–1029
Rosty C, Peter M, Zucman J, Validire P, Delattre O, Aurias A (1998) Cytogenetic and molecular analysis of a t(1;22)(p36;q11.2) in rhabdoid tumor with a putative homozygous deletion of chromosome 22. Genes Chromosomes Cancer 21:82–89
Rousseau-Merck MF, Versteege I, Legrand I, Couturier J, Mariral A, Delattre O, Aurias A (1999) hSNF5/INI1 inactivation is mainly associated with homozygous deletions and mitotic recombinations in rhabdoid tumors. Cancer Res 59:3152–3156
Simons J, Teshima I, Zielenska M, Edwards V, Taylor G, Squire J, Thorner P (1999) Analysis of chromosome 22q as an aid to the diagnosis of rhabdoid tumor. Am J Surg Pathol 23:982–988
Uno K, Takita J, Yokomori K, Tanaka Y, Ohta S, Shimada H, Gilles FH, Sugita K, Abe S, Sako M, Hashizume K, Hayashi Y (2002) Aberrations of the hSNF5/INI1 gene are restricted to malignant rhabdoid tumors or atypical teratoid/rhabdoid tumors in pediatric solid tumors. Genes Chromosomes Cancer 34:33–41
Versteege I, Sevenet N, Lange J, Rousseau-Merck MF, Ambros P, Handgretinger R, Aurias A, Delattre O (1998) Truncating mutations of hSNF5/INI1 in aggressive paediatric cancer. Nature 394:203–206
Zhang ZK, Davies KP, Allen J, Zhu L, Pestell RG, Zagzag D, Kalpana GV (2002) Cell cycle arrest and repression of cyclin D1 transcription by INI1/hSNF5. Mol Cell Biol 22:5975–5988
Acknowledgements
Grant support: grants-in-aid for Scientific Research on priority areas (C) and the Center of Excellence Program for Research on molecular destruction and reconstruction of tooth and bone from the Ministry of Education, Culture, Sports, Science, and Technology, Japan; and a grant-in-aid from Core Research for Evolutionary Science and Technology of the Japan Science and Technology Corporation.
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Misawa, A., Hosoi, H., Imoto, I. et al. Translocation (1;22)(p36;q11.2) with concurrent del(22)(q11.2) resulted in homozygous deletion of SNF5/INI1 in a newly established cell line derived from extrarenal rhabdoid tumor. J Hum Genet 49, 586–589 (2004). https://doi.org/10.1007/s10038-004-0191-y
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DOI: https://doi.org/10.1007/s10038-004-0191-y