Abstract
The human chromosome 15q11-q13, or mouse chromosome 7C, is an imprinting domain controlled by bipartite imprinting centers (ICs): Prader-Willi syndrome (PWS)-IC and Angelman syndrome (AS)-IC. PWS-IC functions to maintain the paternal epigenotype on the paternal chromosome in somatic cells, while AS-IC plays a role in the establishment of the maternal epigenetic mark at PWS-IC in the female germline or early embryos. Several alternative exons and promoters of Snurf–Snrpn (SNRPN upstream reading frame–small nuclear ribonucleoprotein polypeptide N) are expressed as “IC transcripts”. Previous studies have shown that IC-transcript expression is restricted to the brain. We studied expression of the mouse IC-transcript in tissues including brain and oocytes as well as in cultured neurons and glia cells by RT-PCR and by in situ hybridization (ISH) in oocytes. The IC transcript was strongly expressed in brain (especially in neurons) and ovary (especially in oocytes and granulosa cells), while no expression was found in other tissues. This was confirmed by quantitative analysis and ISH. Expression levels in the brain were 7-fold higher compared to those in ovaries. ISH signals were observed in oocytes and granulosa cells of the secondary and developing follicles. These findings, together with previous data, suggest that the IC transcript may be associated with the establishment of PWS-IC methylation on the maternal chromosome as an AS-IC cis-acting element.
Similar content being viewed by others
Log in or create a free account to read this content
Gain free access to this article, as well as selected content from this journal and more on nature.com
or
References
Bielinska B, Blaydes SM, Buiting K, Yang T, Krajewska-Walasek M, Horsthemke B, Brannan CI (2000) De novo deletions of SNRPN exon 1 in early human and mouse embryos result in a paternal to maternal imprint switch. Nat Genet 25:74–78
Braude P, Bolton V, Moore S (1988) Human gene expression first occurs between the four- and eight-cell stages of preimplantation development. Nature 332:459–461
Bressler J, Tsai TF, Wu MY, Tsai SF, Ramirez MA, Armstrong D, Beaudet AL (2001) The SNRPN promoter is not required for genomic imprinting of the Prader-Willi/Angelman domain in mice. Nat Genet 28:232–240
Buiting K, Lich C, Cottrell S, Barnicoat A, Horsthemke B (1999) A 5-kb imprinting center deletion in a family with Angelman syndrome reduces the shortest region of deletion overlap to 880 bp. Hum Genet 105:665–666
Dittrich B, Buiting K, Korn B, Rickard S, Buxton J, Saitoh S, Nicholls RD, Poustka A, Winterpacht A, Zabel B, Horsthemke B (1996) Imprint switching on human chromosome 15 may involve alternative transcripts of the SNRPN gene. Nat Genet 14:163–170
Farber C, Dittrich B, Buiting K, Horsthemke B (1999) The chromosome 15 imprinting centre (IC) region has undergone multiple duplication events and contains an upstream exon of SNRPN that is deleted in all Angelman syndrome patients with an IC microdeletion. Hum Mol Genet 8:337–343
Gilchrist RB, Ritter LJ, Armstrong DT (2004) Oocyte–somatic cell interactions during follicle development in mammals. Anim Reprod Sci 82–83:431–446
Glenn CC, Saitoh S, Jong MT, Filbrandt MM, Surti U, Driscoll DJ, Nicholls RD (1996) Gene structure, DNA methylation, and imprinted expression of the human SNRPN gene. Am J Hum Genet 58:335–346
Haruta M, Meguro M, Sakamoto YK, Hoshiya H, Kashiwagi A, Kaneko Y, Mitsuya K, Oshimura M (2005) Narrowed abrogation of the Angelman syndrome critical interval on human chromosome 15 does not interfere with epigenotype maintenance in somatic cells. J Hum Genet 50:124–132
Hishikawa Y, Koji T, Dhar DK, Kinugasa S, Yamaguchi M, Nagasue N (1999) Metallothionein expression correlates with metastatic and proliferative potential in squamous cell carcinoma of the oesophagus. Br J Cancer 81:712–720
Huntriss J, Daniels R, Bolton V, Monk M (1998) Imprinted expression of SNRPN in human preimplantation embryos. Am J Hum Genet 63:1009–1014
Kantor B, Kaufman Y, Makedonski K, Razin A, Shemer R (2004) Establishing the epigenetic status of the Prader-Willi/Angelman imprinting center in the gametes and embryo. Hum Mol Genet 13:2767–2779
Koji T, Brenner RM (1993) Localization of estrogen receptor messenger ribonucleic acid in rhesus monkey uterus by non radioactive in situ hybridization with digoxigenin-labeled oligodeoxynucleotides. Endocrinology 132:382–392
Li Q, Peterson KR, Fang X, Stamatoyannopoulos G (2002) Locus control regions. Blood 100:3077–3086
Nicholls RD, Knepper JL (2001) Genome organization, function, and imprinting in Prader-Willi and Angelman syndromes. Annu Rev Genomics Hum Genet 2:153–175
Ohta T, Gray TA, Rogan PK, Buiting K, Gabriel JM, Saitoh S, Muralidhar B, Bilienska B, Krajewska-Walasek M, Driscoll DJ, Horsthemke B, Butler MG, Nicholls RD (1999) Imprinting-mutation mechanisms in Prader-Willi syndrome. Am J Hum Genet 64:397–413
Shemer R, Birger Y, Riggs AD, Razin A (1997) Structure of the imprinted mouse Snrpn gene and establishment of its parental-specific methylation pattern. Proc Natl Acad Sci USA 94:10267–10272
Shutle EKW, Lyon HO, Hoyer PE (1992) Simultaneous quantification of DNA and RNA in tissue sections. A comparative analysis of the methyl green-pyronin technique with the gallocyanin chromalum and Feulgen procedures using image cytometry. Histochem J 24:305–310
Szabo PE, Mann JR (1995a) Allele-specific expression and total expression levels of imprinted genes during early mouse development: implications for imprinting mechanisms. Genes Dev 9:3097–3108
Szabo PE, Mann JR (1995b) Biallelic expression of imprinted genes in the mouse germ line: implications for erasure, establishment, and mechanisms of genomic imprinting. Genes Dev 9:1857–1868
Wilkins JF (2005) Genomic imprinting and methylation: epigenetic canalization and conflict. Trends Genet 21:356–365
Yamasaki K, Joh K, Ohta T, Masuzaki H, Ishimaru T, Mukai T, Niikawa N, Ogawa M, Wagstaff J, Kishino T (2003) Neurons but not glial cells show reciprocal imprinting of sense and antisense transcripts of Ube3a. Hum Mol Genet 12:837–847
Yang T, Adamson TE, Resnick JL, Leff S, Wevrick R, Francke U, Jenkins NA, Copeland NG, Brannan CI (1998) A mouse model for Prader-Willi syndrome imprinting-centre mutations. Nat Genet 19:25–31
Yoshii A, Koji T, Ohsawa N, Nakane PK (1995) In situ localization of ribosomal RNAs is a reliable reference for hybridizable RNA in tissue sections. J Histochem Cytochem 43:321–328
Acknowledgements
N.N. was supported in part by CREST from the Japan Science and Technology Agency. T.O. was supported in part by “Academic Frontier” Project for Private Universities: matching fund subsidy from the Ministry of Education, Culture, Sports, Science, and Technology (MEXT), 2002–2006, and a Grant-in-Aid for Scientific Research (Category C, No. 15590290) from MEXT. We also thank Ms. Yasuko Noguchi and Naoko Yanai for their technical assistance.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Mapendano, C.K., Kishino, T., Miyazaki, K. et al. Expression of the Snurf–Snrpn IC transcript in the oocyte and its putative role in the imprinting establishment of the mouse 7C imprinting domain. J Hum Genet 51, 236–243 (2006). https://doi.org/10.1007/s10038-005-0351-8
Received:
Accepted:
Published:
Issue date:
DOI: https://doi.org/10.1007/s10038-005-0351-8
Keywords
This article is cited by
-
Expression of SNURF–SNRPN upstream transcripts and epigenetic regulatory genes during human spermatogenesis
European Journal of Human Genetics (2009)
-
A targeted deletion upstream of Snrpn does not result in an imprinting defect
Mammalian Genome (2007)