Table 1 PCR and sequencing primers utilized for pyrosequencing assay
(a) PCR primers |
Forward: 5′–GGGTTATTTGGTGATTAAGGTG–3′ |
Reverse: biotin-5′–AAAACCVTCCACCAAAAA–3′ |
(b) Sequencing primers |
S1 Primer: 5′–TTTGGTGATTAAGGTGG–3′ |
Sequence to analyze |
5′–TGGYGGTGGAYGGYGATTYGGGTTAGAAYGTTTGGTTGTYGTATTAG–3′ |
Dispensation order |
5′–GTAGTCGTGTATCAGTCGTATCGTAGTATCGTGTAGTCGTA–3′ |
S2 Primer: 5′–YRGYRTGTGGGYGTATAAT–3′ |
Sequence to analyze |
5′–GGYGAGGTGYGTATYGTTAGGTTGTTGAGYGAGYGYGAYG–3′ |
Dispensation order |
5′–TGTCGAGTAGTCGTGATCGTAGTGTGATGTCGATGTCAGATCGTATC–3′ |
S3 Primer: 5′–TGGTGTTKGTTAAGGATAA–3′ |
Sequence to analyze |
5′–TGGYGAGTTTTYGYGTTYGGTTATYGTTAYGTTGTAYGTGT–3′ |
Dispensation order |
5′–GTAGTCGATGTTCAGTCTGTCGTGATCGTGATCGTGTGATCGTG–3′ |