Table 3 Relative tumor hypomethylation of LINE-1 (difference between methylation levels of patient's nonneoplastic liver sample and tumor sample) and clinicopathologic characteristics

From: Hypomethylation of long interspersed nuclear element-1 in hepatocellular carcinomas

Variable

N

Tumor hypomethylation mean±standard deviation)

P-value

Age a

 60 and younger

12

11±12

0.2

 More than 60

21

18±17

 

Gender a

 Male

21

18±18

0.2

 Female

12

11±11

 

Country

 High risk

24

24±13

0.02

 Low risk

33

15±16

 

Cirrhosis a

 Absent

24

17±17

0.5

 Present

31

20±13

 

Hepatitis a

 Absent

18

12±16

0.02

 Present

38

22±14

 

Grade

 Well

7

6±16

0.02

 Moderate

38

19±14

 

 Poor

12

25±12

 

Stage a

 1–2

8

17±18

0.5

 3 and 4

23

13±15

 

p53 gene a , b

 Wild type

33

17±15

0.03

 Mutated

15

27±15

 

p16 methylation b

 Absent

32

16±13

0.1

 Present

25

23±17

 

CAGNAIG methylation b

 Absent

47

19±14

0.9

 Present

10

19±20

 

ER methylation b

 Absent

23

11±13

0.001

 Present

34

25±14

 

COX-2 methylation b

 Absent

48

22±14

0.003

 Present

9

6±13

 

MINT31 methylation b

 Absent

34

19±15

1.0

 Present

23

19±16

 

MINT1 methylation b

 Absent

43

21±15

0.2

 Present

14

15±15

 

MINT2 methylation a , b

 Absent

51

19±15

0.1

 Present

3

4±9

 

MINT27 methylation b

 Absent

50

19±16

0.9

 Present

7

19±13

 

CIMP status b

 Negative

9

7±11

0.04

 Intermediate

29

22±14

 

 Positive

19

21±16

 
  1. aData unavailable for all cases.
  2. bp53 mutation or methylation in tumor tissue.