Table 1 Primers used to amplify tumor suppressor gene promoters

From: Epigenetic instability is rare in fibrolamellar carcinomas but common in viral-associated hepatocellular carcinomas

Tumor suppressor gene

UF 5′ TO 3′

UR 5′ TO 3′

MF 5′ TO 3′

MR 5′ TO 3′

TP5311

GTAGTTTGAATGTTTTTATTTTGGT

CCTACTACACCCTCTACAAACA

GTAGTTTGAACGTTTTTATTTTGGC

CCTACTACGCCCTCTACAAACG

CDKN2A (P14)12

TGAGTTTGGTTTTGGAGGTGG

AACCACAACAACAAACACCCCT

GTCGAGTTCGGTTTTGGAGG

AAAACCACAACGACGAACG

CDKN2B (P15)13

TGTGATGTGTTTGTATTTTGTGGTT

CCATACAATAACCAAACAACCAA

GCGTTCGTATTTTGCGGTT

CGTACAATAACCGAACGACCGA

P1612

TTATTAGAGGGTGGGGTGGATTGT

CAACCCCAAACCACAACCATAA

TTATTAGAGGGTGGGGCGGATCGC

ACCCCGAACCGCGACCGTAA

SOCS114

TATTTTGTTTGTATGTTGATTATTG

AAACTCAACACACAACCACTC

TCGTTCGTACGTCGATTATC

AAAAAAATACCCACGAACTCG

GSTP115

GATGTTTGGGGTGTAGTGGTTGTT

CCACCCCAATACTAAATCACAACA

TTCGGGGTGTAGCGGTCGTC

GCCCCAATACTAAATCACGACG

RASSF1

GTTGGGAATTTAAATATTATGGTGA

TAAAACAAAACAATTACAAAACAAT

GTTGGGAATTTAAATATTATGGCG

TAAAACAAAACAATTACGAAACGAT

FLJ13081

TTAGTAGTTTTTTGGTGGTTTTATT

CAACTCCTCTTCAACAACTCAAC

TAGTAGTTTTTCGGCGGTTTTATC

AACTCCTCTTCAACGACTCGAC

RARA16

GGTTTTGTGTGATTTGGTTTTAT

CTCTCACTAAACTCACCTAACAATA

GGTTTCGCGCGATTCGGTTTTAC

CTCTCGCTAAAGTCGCCTAACGACG

HPP117

GTTATTGTTGTTGTTTTTGTTGTTGT

AACAACTTCCAAAAAACACAAAATCA

GTTATCGTCGTCGTTTTTGTTGTC

GACTTCCGAAAAACACAAAATCG

CDH1 (E-cadherin)18

TAATTTTAGGTTAGAGGGTTATTGT

CACAACCAATCAACAACACA

TTAGGTTAGAGGGTTATCGCGT

TAACTAAAAATTCACCTACCGAC