Table 1 Statistical comparisons of the clinicopathological and molecular features of patients by methylation status of the MGMT promoter

From: MGMT methylation is associated primarily with the germline C>T SNP (rs16906252) in colorectal cancer and normal colonic mucosa

 

Valid cases, tumours (%)

MGMT Meth (%)

MGMT Unmeth (%)

P-value

Clinicopathological tumour features

 Mean age, years (±1 s.d.)

68.9±12.2

70.4 (±12.6)

68.3 (±12.0)

0.012*

 Gender

1123 (100)

   

Female

505 (45.0)

167 (33.1)

338 (66.9)

0.000

Male

618 (55.0)

145 (23.5)

473 (76.5)

 

 Mucinous histology

1119 (99.6)

   

Mucinous

230 (20.5)

78 (33.9)

152 (66.1)

0.033

Non-mucinous

889 (79.2)

234 (26.3)

655 (73.7)

 

 IELs

1122 (99.9)

   

Conspicuous

176 (15.7)

64 (36.4)

112 (63.6)

0.018

Inconspicuous

946 (84.2)

248 (26.2)

698 (73.8)

 

Lymphovascular space invasion

1113 (99.1)

   

Absent

669 (59.6)

213 (31.8)

456 (68.2)

0.001

Present

444 (39.5)

96 (21.6)

348 (78.4)

 

Molecular features of tumour

 Microsatellite status

1121 (99.8)

   

MSI

146 (13.0)

53 (36.3)

93 (63.7)

0.037

MSS

975 (86.8)

258 (26.5)

717 (73.5)

 

 CIMP status

1120 (99.8)

   

Positive

156 (13.9)

60 (38.5)

96 (61.5)

0.003

Negative

964 (85.8)

252 (26.1)

712 (73.9)

 

 BRAF mutation status

1119 (99.6)

   

V600E Mutant

138 (12.3)

49 (35.5)

89 (64.5)

0.047

Wild type

981 (87.4)

263 (26.8)

718 (73.2)

 

 KRAS mutation status

1121 (99.9)

   

Mutant

358 (31.9)

137 (38.3)

221 (61.7)

0.000

Wild type

763 (68.0)

175 (22.9)

588 (77.1)

 

 MLH1 methylation

1101 (98.1)

   

Methylated

127(11.3)

49 (38.6)

78 (61.4)

0.003

Unmethylated

974 (86.8)

261 (26.8)

713 (73.2)

 

 CDKN2A methylation

1075 (95.7)

   

Methylated

481 (42.8)

182 (37.8)

299 (62.2)

0.000

Unmethylated

594 (52.9)

126 (21.2)

468 (78.8)

 

Patient genotype

 SNP rs16906252

1039 (92.5)

   

CT

151 (13.4)

91 (60.3)

60 (39.7)

 

TT

2 (0.2)

2 (100)

0 (0)

0.000

CC

886 (78.9)

195 (22.0)

691 (78.0)

 
  1. The number of cases (tumours) for which data was available is listed for each parameter tested. The percentages provided in the third and fourth columns are with respect to the group against which MGMT methylation status is being tested. All P-values were performed using χ2 test, except for a comparison of age in which a Student's t-test was used. Meth, methylated; Unmeth, unmethylated; IELs, intraepithelial lymphocytes.