Table 2 Primers designed to detect E6 mRNA expression of the low-risk HPV types

From: Comprehensive analysis of human papillomavirus prevalence and the potential role of low-risk types in verrucous carcinoma

HPV type

Sequence

Target gene

Amplicon size (bp)

HPV6

F: 5′-GTGCAAGACGTTTAATCTATCTATGC-3′

R: 5′-TATGAATAAATCTCTGCTGTGGTC-3′

E6

91

HPV11

F: 5′-CACACTCTGCAAATTCAGTGCG-3′

R: 5′-CACACAACCTTTAGGTTCTTATAGGC-3′

E6

92

snRNP U1A

F: 5′-CAGTATGCCAAGACCGACTCAGA-3′

R: 5′-GGCCCGGCATGTGGTGCATAA-3′

Housekeeping gene

215

  1. F, forward; R, reverse.
  2. The U1 small nuclear ribonucleoprotein-specific A protein was included as a quality control of the procedure.