Table 2 Rare variants analysis using the KBAC method in the European-ancestry cohort: tolerated and non-conserved, non-exonic and variants that in controls had a MAF >0.01
From: The PHF21B gene is associated with major depression and modulates the stress response
Chr | Position start | Position stop | Gene name | Transcript name(s) | P-value (one-sided) | KBAC (one-sided) | FDR (one-sided) | Sample size used | # Markers | # Multi-marker genotypes |
|---|---|---|---|---|---|---|---|---|---|---|
22 | 45248966 | 45435430 | PHF21B | CCDS46727.1 | 0.001 | 0.027 | 0.068 | 972 | 6 | 6 |
22 | 45152408 | 45288475 | ARHGAP8 | CCDS33664.1 | 0.003 | 0.027 | 0.102 | 972 | 16 | 8 |
22 | 45248966 | 45434692 | PHF21B | CCDS56234.1 | 0.001 | 0.027 | 0.102 | 972 | 6 | 6 |
22 | 45248966 | 45435430 | PHF21B | CCDS14061.1 | 0.002 | 0.027 | 0.102 | 972 | 6 | 6 |
22 | 45152408 | 45288475 | ARHGAP8 | CCDS14060.2 | 0.003 | 0.027 | 0.123 | 972 | 16 | 8 |
