Table 4 Hippocampal quantitative gene expression analyses for PHF21B gene variants extracted from the Braineac web server (UK Brain Expression Consortium, UKBEC)
From: The PHF21B gene is associated with major depression and modulates the stress response
rs ID | Variant | Expr ID | P-value | Tissue | Genotype_counts | Allele_frequency |
|---|---|---|---|---|---|---|
rs1003851 | chr22:44782265 | 3963529 | 3.90E−05 | HIPP | CC=5; CT=46; TT=76 | C=20.9%; T=79.1% |
rs117160508 | chr22:45442461 | 3963529 | 1.60E−04 | HIPP | CC=1; CG=12; GG=119 | C=5.2%; G=94.8% |
rs118154683 | chr22:45442465 | 3963529 | 1.60E−04 | HIPP | TT=1; TA=12; AA=119 | T=5.2%; A=94.8% |
rs75806917 | chr22:45442547 | 3963529 | 1.60E−04 | HIPP | GG=1; GT=11; TT=119 | G=4.9%; T=95.1% |
rs8138025 | chr22:45974757 | 3963548 | 1.90E−04 | HIPP | AA=19; AG=63; GG=52 | A=37.7%; G=62.3% |
rs5765490 | chr22:45974913 | 3963548 | 2.10E−04 | HIPP | TT=19; TC=63; CC=52 | T=37.7%; C=62.3% |
rs62228464 | chr22:45113754 | 3963550 | 6.60E−05 | HIPP | CC=18; CA=51; AA=61 | C=32.5%; A=67.5% |
