Table 1 Assessment of FlyBase euchromatic protein-coding gene annotations

From: Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures

Regions evaluated

Total

Confirm

Abstain

Reject*

Named genes

4,711

4,566 (96.9%)

105 (2.2%)

40 (0.8%)

CGid-only genes

9,022

7,879 (87.3%)

729 (8.1%)

414 (4.6%)

Non-coding regions†

15,564

3 (0.0%)

131 (0.8%)

15,430 (99.1%)

  1. *A minority of rejected genes are false rejections; see Fig. 3b and text for details.
  2. †Regions ≥300 nucleotides in length randomly chosen from the non-coding part of the genome (see Supplementary Methods 2a).
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