Supplementary Figure 8: ROC curves for the AUCs shown in Figure 3f
From: Predicting the sequence specificities of DNA- and RNA-binding proteins by deep learning
ROC curves for the AUCs shown in Figure 3f, where the HT-SELEX-trained (in vitro) TF models were applied to in vivo (ChIP) sequences. For the semi-automatic method of Jolma et al. we show the curve for whichever PWM performed best on the test data; summing the scores of their choices of PFMs resulted in worse performance overall, so it is not shown.
