Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Primer
  • Published:

How does multiple testing correction work?

When prioritizing hits from a high-throughput experiment, it is important to correct for random events that falsely appear significant. How is this done and what methods should be used?

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1: Associating confidence measures with CTCF binding motifs scanned along human chromosome 21.

References

  1. Phillips, J.E. & Corces, V.G. Cell 137, 1194–1211 (2009).

    Article  Google Scholar 

  2. Kim, T.H. et al. Cell 128, 1231–1245 (2007).

    Article  CAS  Google Scholar 

  3. Staden, R. Methods Mol. Biol. 25, 93–102 (1994).

    CAS  PubMed  Google Scholar 

  4. Benjamini, Y. & Hochberg, Y. J. R. Stat. Soc., B 57, 289–300 (1995).

    Google Scholar 

  5. Kerr, K.F. Bioinformatics 25, 2035–2041 (2009).

    Article  CAS  Google Scholar 

  6. Storey, J.D. J. R. Stat. Soc. Ser. A Stat. Soc. 64, 479–498 (2002).

    Article  Google Scholar 

  7. Efron, B., Tibshirani, R., Storey, J. & Tusher, V. J. Am. Stat. Assoc. 96, 1151–1161 (2001).

    Article  Google Scholar 

  8. Dudoit, S. & van der Laan, M.J. Multiple Testing Procedures with Applications To Genomics (Springer, New York, 2008).

    Book  Google Scholar 

  9. Schneider, T.D. & Stephens, R.M. Nucleic Acids Res. 18, 6097–6100 (1990).

    Article  CAS  Google Scholar 

Download references

Acknowledgements

National Institutes of Health award P41 RR0011823.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to William S Noble.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Noble, W. How does multiple testing correction work?. Nat Biotechnol 27, 1135–1137 (2009). https://doi.org/10.1038/nbt1209-1135

Download citation

  • Issue date:

  • DOI: https://doi.org/10.1038/nbt1209-1135

This article is cited by

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing