Table 1 Identification of single-cell clones bearing NanoLuc integrations.

From: A generic strategy for CRISPR-Cas9-mediated gene tagging

Gene

gRNA ID

gRNA sequence

Tagged clones/total clones

ID1

2655

5′-GTGCTGAGCGGAGCCCGGAC-3′

2/24

ID1

2656

5′-GGCGCTGATCTCGCCGTTGA-3′

5/24

IRF9

2659

5′-GGCCTTTGCCCGATACTTGC-3′

1/24

IRF9

2660

5′-AGTCTGCTCCAGCAAGTATC-3′

0/24

TAP2

2663

5′-TGCGGGACAGAAACAACGTC-3′

0/24

TAP2

2664

5′-CATCCAGGATGAGGACCCGC-3′

0/24

CCL2

2665

5′-ACAGATCTCCTTGGCCACAA-3′

0/24

CCL2

2666

5′-TCAGGATTCCATGGACCACC-3′

1/24

IL6

669

5′-GTGCCTGCAGCTTCGTCAGC-3′

3/24

  1. gRNA, guide RNA.
  2. Pools of transfected cells described in Fig. 1 were subjected to limiting dilution and 24 single-cell clones were isolated per condition. Each clone was genotyped by PCR as described in Fig. 1 to identify clones bearing NanoLuc integrations. Identity of PCR products was confirmed by Sanger sequencing.