Table 1 Analysed pluripotent stem cell lines and their characteristics.

From: Reprogramming triggers endogenous L1 and Alu retrotransposition in human induced pluripotent stem cells

Stem cell line

Parental cells

Reprogramming factors

Factor delivery by

Reference

Passages (p) assayed by RC-seq

 

Name

Description

    

hiPS-SB4

HFF-1

Foreskin fibroblasts (male)

OCT-4, SOX2, KLF4 and c-MYC

Sleeping Beauty transposon

26

43, 53

hiPS-SB5

  

OCT-4, SOX2, KLF4, c-MYC and LIN28

  

40, 59

hiPS-CRL1502

CRL1502

Dermal fibroblasts (female)

OCT-4, SOX2, NANOG, LIN28, KLF4 and c-MYC

oriP/EBNA1-based pCEP4 episomal vector

25

15, 40

hiPS-CRL2429

CRL2429

Dermal fibroblasts (male)

   

11, 40

hiPS-FB

FB

Dermal fibroblasts (female)

OCT-4, SOX2, KLF4 and c-MYC

Lentiviral vector

68

7, 23

hFF-iPS4

HFF-1

Foreskin fibroblasts (male)

OCT-4, SOX2, NANOG and LIN28

 

Unpublished

58

hCBiPS1hCBiPS2

hCBEC

Cord blood-derived endothelial cells (male)

OCT-4, SOX2, NANOG and LIN28

 

27

3023

HES-3

hESC lines

NA

NA

73

92, 102

H9

    

74

30, 60

HESG

    

Unpublished

10, 23