Table 1 Repeat element landscape and selected pseudogenes of Tarsius syrichta (detailed landscape is presented in Supplementary Table 2).
From: Genome sequence of the basal haplorrhine primate Tarsius syrichta reveals unusual insertions
Repeat type | Families | Copies ( × 1000) | Genome % | Tarsier-specific ( × 1000) | Tarsier active families |
|---|---|---|---|---|---|
LINEs | 148 | 982 | 19.57 | 54.4 | 9 |
SINEs | 16 | 1697 | 12.04 | 175.4 | 5 |
TINEs | 3 | 30 | 0.07 | 4.7 | 2 |
LTR | 260 | 447 | 5.79 | 5.9 | 12 |
DNA-Trans | 219 | 368 | 2.63 | 1.1 | 8 |
sRNA pseudo | 65 | 13 | 0.04 | 1.7 | — |
Unclassified | 29 | 1.8 | 0.01 | — | — |
Satellite | — | — | 1.24 | — | — |
Low complexity | — | — | 2.47 | — | — |
Total | 740 | 3539 | 43.85 | 243.2 | 36 |
