Table 1 Overview over the genes included in the array.

From: Single-cell profiling reveals heterogeneity and functional patterning of GPCR expression in the vascular system

 

Genes included

No.

GPCRs

– Adrenergic: Adra1a, Adra1b, Adra1d, Adra2c, Adrb1, Adrab2– Chemokine: Ccbp2/Ackr2, Ccr10, Ccr1, Ccr2, Ccr3, Ccr4, Ccr5, Ccr6, Ccr7, Ccr8, Ccr9, Ccrl1, Ccrl2, Cx3cr1, Cxcr1, Cxcr2, Cxcr3, Cxcr4, Cxcr5, Cxcr6, Cxcr7, Xcr1– Lysophospholipid: Lpar1, Lpar2, Lpar3, Lpar4, Lpar6 , S1pr1, S1pr2 , S1pr3, S1pr4– Miscellaneous: Adcyap1r1, Adora1, Adora2a, Agtr1a, Aplnr , Avpr1a, Bdkrb1 , Bdkrb2, C3ar1, C5ar1, Calcrl, Chrm2, Chrm3, Cmklr1, Cnr2, Crhr2, Cysltr1, Ednra, Ednrb, Fpr1, Fpr2, Gabbr1, Glp1r, Glp2r, Hrh1 , Hrh2, Htr1b , Htr2a, Niacr1 , Npy1r, Olfr78, Prokr1, Ptafr, Pth1r, Smo, Sstr4 , Sucnr1, Tas2r126, Tas2r135, Tas2r143 , Vipr1, Vipr2– Orphan: Cd97, Celsr2, Darc, Eltd1, Emr1, Emr4, Gpr107, Gpr108, Gpr111, Gpr114, Gpr116, Gpr124, Gpr125, Gpr126, Gpr132, Gpr133, Gpr137, Gpr137b, Gpr146 , Gpr153, Gpr171, Gpr174 , Gpr176, Gpr18, Gpr182 , Gpr183, Gpr19, Gpr21, Gpr30, Gpr34, Gpr35 Gpr39, Gpr4, Gpr52 , Gpr56, Gpr63, Gpr64, Gpr65, Gpr83, Gpr97, Gprc5a, Gprc5b, Gprc5c, Lgr4, Lgr5, Lgr6, Lphn1, Lphn2, Lphn3, Mrgprf, Mrgprh– Prostanoid: Ptger1, Ptger2, Ptger3, Ptger4, Ptgfr, Ptgir, Tbxa2r– Protease: F2r, F2rl1, F2rl2, F2rl3– Purinergic: P2ry1, P2ry10, P2ry12, P2ry13, P2ry14, P2ry2, P2ry6

154 (inton-span-ning: 132)

Cell identity

eGFP, Myh11 (smooth muscle), Cdh1 (epithelial), Cdh5 (endothelial), Ptprc (leukocyte), Itgam (myeloid), Ly6g (neutrophil), Cd19 (B lymphocyte), Cd4 (CD4 T lymphocyte), Cd8 (CD8 T lymphocyte), Lyve1 (lymphatic EC), Cspg4 (pericyte), Tnni2 (skeletal muscle)

13

Cell function

– Cell activation/differentiation: Cd25, Cd44, H2-Ab1, Pecam1, Acta2, Edn1, Dll4, Sele, Smtn, Icam1, Vcam1, Col1a2, Col3a1– Cytokines/Growth factors: Csf2,Csf2rb, Kdr, Pdgfb, Tgfb1, Tnf, Ifng, IL10, Il17a, Il1b, Il2, Il6– Transcription factors: Rorc, Tbx21, Mki67, Egr1, Fos, Hif1a, Hey2, Klf2– Reference genes: Actb, Gapdh, Hprt

36

  1. In addition to the 122 GPCRs identified in NanoString multiplex RNA analysis, 32 receptors that were negative in NanoString analysis were included. Also 13 genes identifying individual cell types as well as 36 function-related genes, including three reference genes, were added. Whenever possible an intron-spanning design was used, but for 22 single exon GPCRs this was not possible (indicated by strikethrough).