Table 1 N. gaditana genome statistics.
From: Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropsis gaditana
Assembly statistics for nuclear genome | |
Estimated genome size | ~29 Mb |
Genomic G+C content | 54.2% |
Number of assembled scaffolds | 2,087 |
Number of scaffolds >100 kb in length | 35 |
Number of scaffolds >20 kb in length | 561 |
Number of scaffolds >2 kb in length | 1,447 |
Scaffold N50 | 257 |
Scaffold L50 | 37,693 bp |
Number of contigs | 5,823 |
Number of contigs >100 kb in length | 25 |
Number of contigs >20 kb in length | 320 |
Number of contigs >2 kb in length | 2,694 |
Contig N50 | 404 |
Contig L50 | 15,294 bp |
Gene statistics | |
Predicted number of nuclear genes | 8,892 |
Chloroplast genes | 124 |
Mitochondrial genes | 36 |
Total number of genes | 9,052 |
Total genes supported by expressed sequence tags | 8,359 (92.3%) |
 Total genes supported by homology (Blast E-value cutoff <1E-10) | 6,319 (69.8%) |
Unique genes | 2,733 (30.2%) |
Average coding sequence length | 1,069 bp |
Average intron length | 220 bp |
Introns per gene | 1.62 |
