Figure 6: Polymorphic sites in the EhSINE1 population are distributed in a mosaic pattern.
From: Recombinant SINEs are formed at high frequency during induced retrotransposition in vivo
The coordinates of the 63 full-length EhSINE1 copies selected for analysis are shown on the left. These copies were selected because they are thought to have retrotransposed most recently12. Sequences of the 63 copies were aligned and nucleotide positions varying in at least 12 copies were selected. In all, 16 such positions found are displayed. Blocks of four consecutive positions with the same sequence have been given the same colour for clarity. The five identical pairs found are indicated by same shading in the left column.
