Figure 4: Development of aTALE transcriptional repressor architecture. | Nature Communications

Figure 4: Development of aTALE transcriptional repressor architecture.

From: Comprehensive interrogation of natural TALE DNA-binding modules and transcriptional repressor domains

Figure 4

(a) Design of SOX2 TALE for TALE-repressor screening. A TALE targeting a 14-bp sequence within the SOX2 locus of the human genome was synthesized as described previously3. (b) List of all repressors screened and their host origin (left). Eight different candidate repressor domains were fused to the C-term of the SOX2 TALE. (c) The fold decrease of endogenous SOX2 messenger RNA (mRNA) is measured using qRT–PCR by dividing the SOX2 mRNA levels in mock-transfected cells by SOX2 mRNA levels in cells transfected with each candidate TALE repressor. (d) Transcriptional repression of endogenous CACNA1C. TALEs using NN, NK and NH as the G-targeting RVD were constructed to target a 18-bp target site within the human CACNA1C locus (site 1 in Fig. 3). Each TALE is fused to the SID repression domain. NLS, nuclear localization signal; KRAB, Krüppel-associated box. All results are collected from three independent experiments in HEK 293FT cells. Error bars indicate s.e.m.; n=3. *P<0.05, Student's t-test.

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