Figure 1: ETAS distribution along the genomes of six elite varieties:
From: Analysis of elite variety tag SNPs reveals an important allele in upland rice
Guichao2 (a), IR64 (b), Minghui63 (c), IRAT104 (d), Koshihikari (e) and Chujing27 (f). For each 500-kb sliding window, the number of ETASs was plotted on the entire genome. The sliding step is 50 kb. The 12 chromosomes are spaced with vertical line. Adjacent chromosomes are delineated using different colours. The horizontal black lines represent the threshold for the 95th percentile of 10,000 permutations of the ETAS numbers for all windows along the genomes. The red asterisk in the IRAT104 panel refers to the peak corresponding to the Nced locus.
