Figure 5: Heterozygous regions in the Pst genome.
From: High genome heterozygosity and endemic genetic recombination in the wheat stripe rust fungus
Heterozygous regions were identified by aligning the sequence of Txjex, a fosmid fully sequenced by Sanger sequencing with c19720 and c18230, two highly similar scaffolds of the Pst-CY32 assembly generated with Illumina sequences from fosmid pools 7PB_Index52_Index26/20PB_Index47_Index8 and 14PB_Index44_Index29_Index6_Index35, respectively. SNPs between the reference Pst-CY32 genome and re-sequenced strains Hu09-2, Pst-78, CY23, PK-CDRD or 104E137A- are marked with blue vertical lines. SNV, heterozygous SNV in the dikaryotic Pst-CY32 genome.
