Figure 3: Phylogeny and orthology relationships with reference genomes.
From: Molecular traces of alternative social organization in a termite genome
Tree topology (filled bold line) was obtained by maximum likelihood analysis on proteins. Hemimetabolous and holometabolous species are depicted by a green and blue background, respectively. For each organism, proteins are represented by bars and classified according to orthoMCL analysis: ‘Eukaryote’ clusters with C. elegans and arthropods; ‘Arthropod’ clusters with D. pulex and insects; ‘Insect’ clusters with Z. nevadensis and another insect; ‘Specific’ groups species-specific paralogues and unclustered proteins; ‘Intermediate’ groups all others clustered proteins. Pie charts illustrate each species’ representativeness of the total number of clusters in the categories eukaryote, arthropod and insect.
