Table 1 Classification of point mutations detected in 66 frozen WT samples.

From: Recurrent somatic mutation in DROSHA induces microRNA profile changes in Wilms tumour

ID

Gene ID

Protein change

Variant type

dbSNP

NHLBI ESP

Polyphen2

SIFT

Mutation Taster

Final classification

ACC_8

DROSHA

p.E1147K

Missense

  

PD

D

DC

PDA

 

TP53

p.P72A

Missense

  

B

T

P

B

 

FBXW7

p.R35C

Missense

  

PD

D

DC

PDA

COG_4181

DROSHA

p.E1147K

Missense

  

PD

D

DC

PDA

COG_1124

DROSHA

p.E1147K

Missense

  

PD

D

DC

PDA

COG_970

DROSHA

p.E1147K

Missense

  

PD

D

DC

PDA

COG_1144

DROSHA

p.E1147K

Missense

  

PD

D

DC

PDA

ACC_12

DROSHA

p.E1147K

Missense

  

PD

D

DC

PDA

COG_128

DROSHA

p.E1147K

Missense

  

PD

D

DC

PDA

COG_1110

DROSHA

p.E993K

Missense

  

PD

D

DC

PDA

COG_526

DROSHA

p.P211T

Missense

rs202227062

T=1; G=12127

B

D

P

PDA

COG_1108

DROSHA

p.Q46*

Nonsense

     

PDA

 

DROSHA

p.R414*

Nonsense

     

PDA

#ACCp_84

DROSHA

p.D1151G

Missense

  

PD

D

DC

PDA

#ACCp_151

DROSHA

p.D1151G

Missense

  

PD

D

DC

PDA

COG_032

DGCR8

p.E518K

Missense

  

PD

D

DC

PDA

 

FBXW7

p.E117del

In-frame del

     

PDA

COG_353

DGCR8

p.Y721H

Missense

  

POD

T

DC

PDA

COG_219

DGCR8

p.S92R

Missense

rs201435288

A=1; T=13005

B

D

DC

PDA

COG_4159

DGCR8

p.A558T

Missense

  

B

D

DC

PDA

ACC_15

DGCR8

p.G55S

Missense

  

PD

D

DC

PDA

COG_4057

DGCR8

p.R32fs

Frameshift dup

     

PDA

COG_117

DICER1

p.I85M

Missense

  

B

T

DC

PDA

 

WT1

p.P183fs

Frameshift ins

     

PDA

 

CTNNB1

p.Y333F

Missense

  

PD

D

DC

PDA

ACC_13

DICER1

p.D1810N

Missense

  

PD

D

DC

PDA

COG_396

DICER1

p.Q48E

Missense

  

PD

T

DC

PDA

ACC_4

XPO5

p.V832I

Missense

  

B

T

P

B

 

TARBP2

p.R296H

Missense

  

B

T

P

B

COG_2050

TARBP2

p.R353fs

Frameshift del

     

PDA

ACC_5

WT1

p.D367_splice

Splice site

     

PDA

 

CTNNB1

p.T41A

Missense

rs121913412

ND

POD

D

DC

PDA

ACC_7

CTNNB1

p.N387K

Missense

  

PD

D

DC

PDA

ACC_1

CTNNB1

p.S45F

Missense

rs121913409

ND

PD

D

DC

PDA

COG_2081

CTNNB1

p.S45P

Missense

rs121913407

ND

PD

D

DC

PDA

COG_6000

WT1

p.K316fs

Frameshift ins

     

PDA

 

WT1

p.F391fs

Frameshift Iins

     

PDA

COG_1290

WT1

p.V379fs

Frameshift del

     

PDA

COG_031

WTX

p.D354fs

Frameshift del

     

PDA

COG_4135

WTX

p.R353*

Nonsense

rs137852216

ND

   

PDA

COG_1065

WTX

p.R497*

Nonsense

     

PDA

ACC_10

TP53

p.339_340EM>V

In-frame del

     

PDA

COG_497

DIS3L2

p.Q230*

Nonsense

     

PDA

COG_4196

DIS3L2

p.R483G

Missense

  

PD

D

DC

PDA

  1. B, benign; D, damaging; DC, disease causing; P, polymorphism; PD, probably damaging; PDA, possibly disease-associated; POD, possibly damaging; T, tolerated; WT, Wilms tumour.
  2. NHLBI ESP, NHLBI Exome Sequencing Project (http://evs.gs.washington.edu/)—the absolute frequency of the variant allele followed by the reference allele are shown; ND, No variant was detected in this region in this database.