Table 1 Summary of VIR genotypes.

	Phenotype			Genotype						Genotype/phenotype concordance*
	*Nig* ^†	*Vir* ^‡	*Total*	*Nig* ^§	*Event 1*	*Event 2*	*Event 3*	*Event 4*	*Event 5*
Mapping population
T128	48	160	208	50	158	—	—	—	—	99.0%
Breeding populations
DT35	11	11	22	11	11	—	—	—	—	100.0%
DT38	8	12	20	8	12	—	—	—	—	100.0%
DP454	9	12	21	9	12	—	—	—	—	100.0%
TT108	6	6	12	6	6	—	—	—	—	100.0%
AVROS	43	—	43	43	—	—	—	—	—	100.0%
MPOB PK575	10	11	21	10	11	—	—	—	—	100.0%
Total	87	52	139	87	52	0	0	0	0	100.0%
Germplasm collections
Angola	261	48	309	262	—	45	1	1	—	99.7%
Madagascar	27	—	27	27	—	—	—	—	—	100.0%
Tanzania	47	12	59	45	—	14	—	—	—	96.6%
Ghana	8	15	23	8	3	4	8	—	—	100.0%
Congo	3	7	10	2		5	1	2	—	90.0%
Cameroon	5	3	8	5	—	—	—	—	3	100.0%
Nigeria	2	2	4	2	2	—	—	—	—	100.0%
Total	353	87	440	351	5	68	10	3	3	99.1%
Overall Total	488	299	787	488	215	68	10	3	3	99.2%

^*Genotype/phenotype concordance calculated as ((number of virescens-phenotyped trees genotyped as either heterozygous or homozygous for events 1, 2, 3, 4 or 5)+(number of nigrescens phenotyped trees genotyped as wild type)) divided by the total number of trees sequenced.
^†Nigrescens fruit exocarp colour phenotype.
^‡Virescens fruit exocarp colour phenotype.
^§Wild-type (nigrescens) genotype.

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