Table 2 Most frequent Vγ4 CDR3 nucleotide sequences that encode the Vγ4 amino-acid sequence SYGLYSSGFHKV.
From: A clonotypic Vγ4Jγ1/Vδ5Dδ2Jδ1 innate γδ T-cell population restricted to the CCR6+CD27− subset
Vγ4 (5′–3′) | N | P | Jγ1 (5′–3′) | Frequency |
|---|---|---|---|---|
S Y G Stop.. | ..S S G F H K V | |||
tcctacggctaaag | atagctcaggttttcacaaggta | Germline | ||
tcctacggc..... | tat | atagctcaggttttcacaaggta | 61–62% | |
tcctacggc..... | ctat | atagctcaggttttcacaaggta | 25–27% | |
tcctacgg..... | t | ctat | atagctcaggttttcacaaggta | 3.8–5% |
tcctacgg...... | gt | tat | atagctcaggttttcacaaggta | 1.5–2.2% |
tcctacgg...... | gctat | atagctcaggttttcacaaggta | 0.9–1.2% | |
tcctacggc..... | ctt | t | atagctcaggttttcacaaggta | 0.6–0.7% |
