Figure 2: DEGs involved in bacterial defence selected by cluster and functional classification analyses. | Nature Communications

Figure 2: DEGs involved in bacterial defence selected by cluster and functional classification analyses.

From: Salicylic acid biosynthesis is enhanced and contributes to increased biotrophic pathogen resistance in Arabidopsis hybrids

Figure 2

(a) Venn diagram showing the number of ‘above-high parent’ and ‘below-low parent’ genes in each Arabidopsis thaliana hybrid at three time points. (b) Venn diagram showing the number of genes (selected from (a)) in each Cluster Analysis Group in F1 hybrids. Group I: expression continuously increased; group II: expression continuously decreased; group III: expression increased first and then decreased; and group IV: expression decreased first and then increased. (c) Enrichment of selected GO categories for genes selected from (b). The biological process with false discovery rate (adjusted P<0.05, Student’s t-test) is shown. (d) Some genes in the salicylic acid pathway, categorized as ‘response to bacterium’ by GO analysis, were upregulated in F1 hybrids.

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