Table 3 TFOs predicted by Triplexator.

From: MEG3 long noncoding RNA regulates the TGF-β pathway genes through formation of RNA–DNA triplex structures

OligoID

TFOs (5′–3′)

Score

TFO1

GGAGAGcAGAGAGGGAGcG

18

TFO2

GGcGGAGAGcAGAGAGGGAGcG

19

TFO3

AGAcGGcGGAGAGcAGAGAGGGAG

21

TFO4

AGGAtGGcAAAGGAtGAAGAGGA

20

TFO5

AAAtGAGAtAAAAGAGG

15

TFO6

GTcTTTGcTTGTGTT

13

TFO7

TGGGTGGGcTTcTGG

13

TFO8

TaGGGTTGTTGTGaG

13

TFO9

GGGcTGTTGTGaGGGG

14

  1. TFOs, triplex-forming oligos; Score, triplex-forming potential scores.
  2. The bold nucleotides indicate overlap with MEG3 TFO with high score.