Figure 2: Computational tracing of 336 and 672 bp minicircles. | Nature Communications

Figure 2: Computational tracing of 336 and 672 bp minicircles.

From: Structural diversity of supercoiled DNA

Figure 2

(a) Docking of 336 bp traces into the cryo-ET densities of open circles. Traces (purple lines) were generated by docking circular strings of length 336 bp into the density maps. Each trace was then used to isolate the minicircles (grey surfaces) from the cryo-ET density maps. (b) Docking of 336 bp traces into the cryo-ET tomograms of writhed minicircles following the same protocol as for the open circles. (c) Docking of double-length (672 bp) traces into the cryo-ET tomograms following the same protocol as for 336 bp.

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