Table 1 Pairwise analysis of homologue between trans-spliced coding transcripts and canonical coding genes using BLASTP.

From: The evolutionary landscape of intergenic trans-splicing events in insects

Number*

Canonical coding gene

 

Cpi

Aae

Aga

Dme

Pxy

Bmo

Hme

Dpl

Tca

Ame

Aec

Cfl

Api

Dpu

Trans-spliced coding transcript

 Aae

32

−

37

24

9

8

11

11

17

17

16

17

14

12

 Dme

7

11

8

−

3

6

8

4

10

7

8

15

8

7

 Bmo

3

3

1

2

4

−

3

7

4

2

2

2

2

1

 Dpl

2

2

0

0

7

4

8

−

0

2

0

0

1

2

 Tca

0

0

2

1

1

0

0

2

−

2

1

1

1

0

 Ame

2

1

3

4

0

1

0

1

1

−

7

5

1

2

 Cfl

0

0

0

0

0

0

1

0

1

1

2

−

0

0

 Api

7

10

12

10

5

5

3

11

17

9

14

13

−

10

  1. Aga, A. gambiae; Aec, A. echinatior; Aae, A. aegypti; Ame, A. mellifera; Api, A. pisum; Bmo, B. mori; Cfl, C. floridanus; Cpi, C. pipiens; Dpu, D. pulex; Dme, D. melanogaster; Dpl, D. plexippus; Hme, H. melpomene; Pxy, P. xylostella; Tca, T. castaneum.
  2. *Number of non-mod trans-spliced coding transcripts that found at least one match to canonical coding gene in other species. The threshold for a match requires 50% identity and 90% coverage between a trans-spliced transcript and a canonical coding gene of other species.
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