Supplementary Figure 3: Cross-validation prediction accuracy across three expression cohorts. | Nature Genetics

Supplementary Figure 3: Cross-validation prediction accuracy across three expression cohorts.

From: Integrative approaches for large-scale transcriptome-wide association studies

Supplementary Figure 3

Using 10-fold cross-validation, prediction R^2 (divided by corresponding cis-h2g) was compuated in the METSIM, YFS and NTR (Wright et al.) cohorts by three methods: best eQTL in the gene, BLUP and BSLMM. Left panels show accuracy as a functino of cis h2g; right panels show accuracy as a function of LRT P-value for non-zero cis-h2g.

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