Table 1 Statistics of the carrot genome and gene prediction
Number | Size | |
|---|---|---|
Assembly feature | ||
Estimated genome size | 473 Mb | |
Assembled sequences (>500 bp) | 4,826 | 421.5 Mb |
N50 | 12.7 Mb | |
Superscaffolds | 89 | 382.3 Mb |
N50 superscaffold | 13.4 Mb | |
Longest superscaffold | 30.2 Mb | |
Remaining scaffolds | 3,379 | 37.2 Mb |
N50 scaffolds | 64.5 kb | |
Remaining contigs | 1,409 | 1.9 Mb |
Scaftigs | 30,938 | 386.8 Mb |
N50 scaftigs | 31.2 kb | |
Anchored sequences | 60 | 361.1 Mb |
Anchored and oriented sequences | 50 | 353 Mb |
GC content | 34.8% | |
Genome annotation | ||
Total repetitive sequence | 193.7 Mb | |
Gene models | 32,113 | 108.2 Mb |
Genes in pseudomolecules | 30,824 (96.0%) | |
Noncoding RNAs | 1,386 | 188.9 kb |
