Supplementary Figure 3: Performance of imputation using different reference panels
From: A reference panel of 64,976 haplotypes for genotype imputation
The x-axis shows the non-reference allele frequency of the SNP being imputed on a log scale. The y-axis shows imputation accuracy measured by aggregate r2 when imputing SNP genotypes into 10 CEU samples. These results are based on using genotypes from sites on Illumina Core Exome SNP array.
