Supplementary Figure 6: Comparison of methods for genotype calling as sample size increases
From: A reference panel of 64,976 haplotypes for genotype imputation
The figure shows a log-log plot of run time vs sample size for four different methods of genotype calling from GL data. For each sample size 5 random 1024 site chunks from chromosome 20 were used. Each dot represents the run time of a single dataset. Lines are drawn between successive means of run times for each value of sample size
