Supplementary Figure 11: Enrichment of autoimmune disease–associated SNPs in T cell HiChIP loop anchors.

(a) Enrichment of specific PICS autoimmune disease and non-immune SNPs in anchors of loops called by Juicer and Fit-Hi-C in comparison to a background shuffled loop set. (b) Enrichment of all PICS autoimmune disease and non-immune SNPs in T cell subset–biased loop anchors and all anchors in comparison to a background shuffled loop set.