Supplementary Figure 4: lncRNA genes expressed differentially during lymphoid differentiation show genomic locational associations with protein-coding genes whose products have hematopoietic and immunological functions.

Functional categories of protein coding gene sets whose lncRNA gene neighbors are significantly enriched among (a) HSPC lncRNA genes, (b) B lineage lncRNA genes, and (c) T lineage lncRNA genes (Groups I,II and III in Figure 3c). Genomic Regions Enrichment of Annotation Tool (GREAT) analysis significance scores (–log10 hypergeometric p value) for enrichment (compared to a background set that consisted of all lncRNAs [listed in Supplementary Table 1]) are depicted. Full names and database details for functional categories are listed in Supplementary Table 8.