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Innate cell communication kick-starts pathogen-specific immunity

Abstract

Innate cells are responsible for the rapid recognition of infection and mediate essential mechanisms of pathogen elimination, and also facilitate adaptive immune responses. We review here the numerous intricate interactions among innate cells that initiate protective immunity. The efficient eradication of pathogens depends on the coordinated actions of multiple cells, including innate cells and epithelial cells. Rather than acting as isolated effector cells, innate cells are in constant communication with other responding cells of the immune system, locally and distally. These interactions are critically important for the efficient control of primary infections as well for the development of 'trained' innate cells that facilitate the rapid elimination of homologous or heterologous infections.

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Figure 1: Factors that shape the type of immune response elicited by infection.
Figure 2: Local and distal intercellular communication.
Figure 3: Factors that shape trained immunity.
Figure 4: Intercellular communication orchestrates effector function and protective immunity.

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  1. Wills-Karp, M. et al. Trefoil factor 2 rapidly induces interleukin 33 to promote type 2 immunity during allergic asthma and hookworm infection. J. Exp. Med. 209, 607–622 (2012).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  2. Patel, N. et al. A2B adenosine receptor induces protective antihelminth type 2 immune responses. Cell Host Microbe 15, 339–350 (2014).

    Article  CAS  PubMed  Google Scholar 

  3. Gause, W.C., Wynn, T.A. & Allen, J.E. Type 2 immunity and wound healing: evolutionary refinement of adaptive immunity by helminths. Nat. Rev. Immunol. 13, 607–614 (2013).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  4. Sutherland, T.E. et al. Chitinase-like proteins promote IL-17-mediated neutrophilia in a tradeoff between nematode killing and host damage. Nat. Immunol. 15, 1116–1125 (2014).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  5. Chiu, C. & Openshaw, P.J. Antiviral B cell and T cell immunity in the lungs. Nat. Immunol. 16, 18–26 (2015).

    Article  CAS  PubMed  Google Scholar 

  6. Yan, N. & Chen, Z.J. Intrinsic antiviral immunity. Nat. Immunol. 13, 214–222 (2012).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Cervantes-Barragan, L. et al. Control of coronavirus infection through plasmacytoid dendritic-cell-derived type I interferon. Blood 109, 1131–1137 (2007).

    Article  CAS  PubMed  Google Scholar 

  8. Ciancanelli, M.J. et al. Infectious disease. Life-threatening influenza and impaired interferon amplification in human IRF7 deficiency. Science 348, 448–453 (2015).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  9. Lang, P.A. et al. Hematopoietic cell-derived interferon controls viral replication and virus-induced disease. Blood 113, 1045–1052 (2009).

    Article  CAS  PubMed  Google Scholar 

  10. Macal, M. et al. Plasmacytoid dendritic cells are productively infected and activated through TLR-7 early after arenavirus infection. Cell Host Microbe 11, 617–630 (2012).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Sonnenberg, G.F. & Artis, D. Innate lymphoid cells in the initiation, regulation and resolution of inflammation. Nat. Med. 21, 698–708 (2015).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  12. Murray, P.J. et al. Macrophage activation and polarization: nomenclature and experimental guidelines. Immunity 41, 14–20 (2014).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  13. Carpenter, S., Ricci, E.P., Mercier, B.C., Moore, M.J. & Fitzgerald, K.A. Post-transcriptional regulation of gene expression in innate immunity. Nat. Rev. Immunol. 14, 361–376 (2014).

    Article  CAS  PubMed  Google Scholar 

  14. Murray, P.J., Rathmell, J. & Pearce, E. SnapShot: Immunometabolism. Cell Metab. 22, 190–190.e1 (2015).

    Article  CAS  PubMed  Google Scholar 

  15. Chen, F. et al. Neutrophils prime a long-lived effector macrophage phenotype that mediates accelerated helminth expulsion. Nat. Immunol. 15, 938–946 (2014).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  16. Kleinnijenhuis, J. et al. Bacille Calmette-Guerin induces NOD2-dependent nonspecific protection from reinfection via epigenetic reprogramming of monocytes. Proc. Natl. Acad. Sci. USA 109, 17537–17542 (2012).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  17. Saeed, S. et al. Epigenetic programming of monocyte-to-macrophage differentiation and trained innate immunity. Science 345, 1251086 (2014).

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  18. Randolph, G.J. A macrophage revolution-and beyond. Immunol. Rev. 262, 5–8 (2014).

    Article  PubMed  Google Scholar 

  19. Gautier, E.L. et al. Immunological Genome Consortium. Gene-expression profiles and transcriptional regulatory pathways that underlie the identity and diversity of mouse tissue macrophages. Nat. Immunol. 13, 1118–1128 (2012).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  20. Gomez Perdiguero, E. et al. Tissue-resident macrophages originate from yolk-sac-derived erythro-myeloid progenitors. Nature 518, 547–551 (2015).

    Article  PubMed  CAS  Google Scholar 

  21. Hashimoto, D. et al. Tissue-resident macrophages self-maintain locally throughout adult life with minimal contribution from circulating monocytes. Immunity 38, 792–804 (2013).

    Article  CAS  PubMed  Google Scholar 

  22. Lavin, Y. et al. Tissue-resident macrophage enhancer landscapes are shaped by the local microenvironment. Cell 159, 1312–1326 (2014).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  23. Hoeffel, G. et al. C-Myb(+) erythro-myeloid progenitor-derived fetal monocytes give rise to adult tissue-resident macrophages. Immunity 42, 665–678 (2015).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  24. Epelman, S., Lavine, K.J. & Randolph, G.J. Origin and functions of tissue macrophages. Immunity 41, 21–35 (2014).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  25. Schiwon, M. et al. Crosstalk between sentinel and helper macrophages permits neutrophil migration into infected uroepithelium. Cell 156, 456–468 (2014).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  26. Silva, M.T. When two is better than one: macrophages and neutrophils work in concert in innate immunity as complementary and cooperative partners of a myeloid phagocyte system. J. Leukoc. Biol. 87, 93–106 (2010).

    Article  CAS  PubMed  Google Scholar 

  27. Bourdonnay, E. et al. Transcellular delivery of vesicular SOCS proteins from macrophages to epithelial cells blunts inflammatory signaling. J. Exp. Med. 212, 729–742 (2015).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  28. Westphalen, K. et al. Sessile alveolar macrophages communicate with alveolar epithelium to modulate immunity. Nature 506, 503–506 (2014).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  29. Ginhoux, F. & Jung, S. Monocytes and macrophages: developmental pathways and tissue homeostasis. Nat. Rev. Immunol. 14, 392–404 (2014).

    Article  CAS  PubMed  Google Scholar 

  30. Serbina, N.V. & Pamer, E.G. Monocyte emigration from bone marrow during bacterial infection requires signals mediated by chemokine receptor CCR2. Nat. Immunol. 7, 311–317 (2006).

    Article  CAS  PubMed  Google Scholar 

  31. Shi, C. et al. Bone marrow mesenchymal stem and progenitor cells induce monocyte emigration in response to circulating toll-like receptor ligands. Immunity 34, 590–601 (2011).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  32. Serbina, N.V., Jia, T., Hohl, T.M. & Pamer, E.G. Monocyte-mediated defense against microbial pathogens. Annu. Rev. Immunol. 26, 421–452 (2008).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  33. Espinosa, V. et al. Inflammatory monocytes orchestrate innate antifungal immunity in the lung. PLoS Pathog. 10, e1003940 (2014).

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  34. Okabe, Y. & Medzhitov, R. Tissue-specific signals control reversible program of localization and functional polarization of macrophages. Cell 157, 832–844 (2014).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  35. Askenase, M.H. et al. Bone-marrow-resident NK cells prime monocytes for regulatory function during infection. Immunity 42, 1130–1142 (2015).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  36. Goldszmid, R.S. et al. NK cell-derived interferon-γ orchestrates cellular dynamics and the differentiation of monocytes into dendritic cells at the site of infection. Immunity 36, 1047–1059 (2012).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  37. Yap, G.S. & Rivera, A. IFN-γ signals a changing of the guards. Immunity 36, 904–906 (2012).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  38. Kreider, T., Anthony, R.M., Urban, J.F. Jr. & Gause, W.C. Alternatively activated macrophages in helminth infections. Curr. Opin. Immunol. 19, 448–453 (2007).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  39. Loke, P. et al. Alternative activation is an innate response to injury that requires CD4+ T cells to be sustained during chronic infection. J. Immunol. 179, 3926–3936 (2007).

    Article  CAS  PubMed  Google Scholar 

  40. Chen, F. et al. An essential role for TH2-type responses in limiting acute tissue damage during experimental helminth infection. Nat. Med. 18, 260–266 (2012).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  41. Pesce, J.T. et al. Arginase-1-expressing macrophages suppress Th2 cytokine-driven inflammation and fibrosis. PLoS Pathog. 5, e1000371 (2009).

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  42. Anthony, R.M. et al. Memory T(H)2 cells induce alternatively activated macrophages to mediate protection against nematode parasites. Nat. Med. 12, 955–960 (2006).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  43. Esser-von Bieren, J. et al. Antibodies trap tissue migrating helminth larvae and prevent tissue damage by driving IL-4Rα-independent alternative differentiation of macrophages. PLoS Pathog. 9, e1003771 (2013).

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  44. Egawa, M. et al. Inflammatory monocytes recruited to allergic skin acquire an anti-inflammatory M2 phenotype via basophil-derived interleukin-4. Immunity 38, 570–580 (2013).

    Article  CAS  PubMed  Google Scholar 

  45. Netea, M.G. Immunological memory in innate immunity. J. Innate Immun. 6, 117–118 (2014).

    Article  PubMed  Google Scholar 

  46. Netea, M.G., Latz, E., Mills, K.H. & O'Neill, L.A. Innate immune memory: a paradigm shift in understanding host defense. Nat. Immunol. 16, 675–679 (2015).

    Article  CAS  PubMed  Google Scholar 

  47. Yoshida, K. et al. The transcription factor ATF7 mediates lipopolysaccharide-induced epigenetic changes in macrophages involved in innate immunological memory. Nat. Immunol. 16, 1034–1043 (2015).

    Article  CAS  PubMed  Google Scholar 

  48. Didierlaurent, A. et al. Sustained desensitization to bacterial Toll-like receptor ligands after resolution of respiratory influenza infection. J. Exp. Med. 205, 323–329 (2008).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  49. Lee, J. et al. Epigenetic modification and antibody-dependent expansion of memory-like NK cells in human cytomegalovirus-infected individuals. Immunity 42, 431–442 (2015).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  50. Jensen, K.J. et al. Heterologous immunological effects of early BCG vaccination in low-birth-weight infants in Guinea-Bissau: a randomized-controlled trial. J. Infect. Dis. 211, 956–967 (2015).

    Article  CAS  PubMed  Google Scholar 

  51. Mantovani, A., Cassatella, M.A., Costantini, C. & Jaillon, S. Neutrophils in the activation and regulation of innate and adaptive immunity. Nat. Rev. Immunol. 11, 519–531 (2011).

    Article  CAS  PubMed  Google Scholar 

  52. Lim, K. et al. Neutrophil trails guide influenza-specific CD8+ T cells in the airways. Science 349, aaa4352 (2015).

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  53. Warnatsch, A., Ioannou, M., Wang, Q. & Papayannopoulos, V. Inflammation. Neutrophil extracellular traps license macrophages for cytokine production in atherosclerosis. Science 349, 316–320 (2015).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  54. Taylor, P.R. et al. Activation of neutrophils by autocrine IL-17A-IL-17RC interactions during fungal infection is regulated by IL-6, IL-23, RORγt and dectin-2. Nat. Immunol. 15, 143–151 (2014).

    Article  CAS  PubMed  Google Scholar 

  55. Sturge, C.R. et al. TLR-independent neutrophil-derived IFN-γ is important for host resistance to intracellular pathogens. Proc. Natl. Acad. Sci. USA 110, 10711–10716 (2013).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  56. Novais, F.O. et al. Neutrophils and macrophages cooperate in host resistance against Leishmania braziliensis infection. J. Immunol. 183, 8088–8098 (2009).

    Article  CAS  PubMed  Google Scholar 

  57. Campbell, E.L. et al. Transmigrating neutrophils shape the mucosal microenvironment through localized oxygen depletion to influence resolution of inflammation. Immunity 40, 66–77 (2014).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  58. Zhang, X., Majlessi, L., Deriaud, E., Leclerc, C. & Lo-Man, R. Coactivation of Syk kinase and MyD88 adaptor protein pathways by bacteria promotes regulatory properties of neutrophils. Immunity 31, 761–771 (2009).

    Article  CAS  PubMed  Google Scholar 

  59. Mócsai, A. Diverse novel functions of neutrophils in immunity, inflammation, and beyond. J. Exp. Med. 210, 1283–1299 (2013).

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  60. Giacomin, P.R. et al. Thymic stromal lymphopoietin-dependent basophils promote Th2 cytokine responses following intestinal helminth infection. J. Immunol. 189, 4371–4378 (2012).

    Article  CAS  PubMed  Google Scholar 

  61. Lantz, C.S. et al. Role for interleukin-3 in mast-cell and basophil development and in immunity to parasites. Nature 392, 90–93 (1998).

    Article  CAS  PubMed  Google Scholar 

  62. Lantz, C.S. et al. IL-3 is required for increases in blood basophils in nematode infection in mice and can enhance IgE-dependent IL-4 production by basophils in vitro. Lab. Invest. 88, 1134–1142 (2008).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  63. Siracusa, M.C. et al. TSLP promotes interleukin-3-independent basophil haematopoiesis and type 2 inflammation. Nature 477, 229–233 (2011).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  64. Ogilvie, B.M., Hesketh, P.M. & Rose, M.E. Nippostrongylus brasiliensis: peripheral blood leucocyte response of rats, with special reference to basophils. Exp. Parasitol. 46, 20–30 (1978).

    Article  CAS  PubMed  Google Scholar 

  65. Min, B. et al. Basophils produce IL-4 and accumulate in tissues after infection with a Th2-inducing parasite. J. Exp. Med. 200, 507–517 (2004).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  66. Voehringer, D., Shinkai, K. & Locksley, R.M. Type 2 immunity reflects orchestrated recruitment of cells committed to IL-4 production. Immunity 20, 267–277 (2004).

    Article  CAS  PubMed  Google Scholar 

  67. Voehringer, D. Protective and pathological roles of mast cells and basophils. Nat. Rev. Immunol. 13, 362–375 (2013).

    Article  CAS  PubMed  Google Scholar 

  68. Siracusa, M.C., Comeau, M.R. & Artis, D. New insights into basophil biology: initiators, regulators, and effectors of type 2 inflammation. Ann. NY Acad. Sci. 1217, 166–177 (2011).

    Article  CAS  PubMed  Google Scholar 

  69. Sullivan, B.M. et al. Genetic analysis of basophil function in vivo. Nat. Immunol. 12, 527–535 (2011).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  70. van Panhuys, N. et al. Basophils are the major producers of IL-4 during primary helminth infection. J. Immunol. 186, 2719–2728 (2011).

    Article  CAS  PubMed  Google Scholar 

  71. Ohnmacht, C. & Voehringer, D. Basophils protect against reinfection with hookworms independently of mast cells and memory Th2 cells. J. Immunol. 184, 344–350 (2010).

    Article  CAS  PubMed  Google Scholar 

  72. Ohnmacht, C. & Voehringer, D. Basophil effector function and homeostasis during helminth infection. Blood 113, 2816–2825 (2009).

    Article  CAS  PubMed  Google Scholar 

  73. Ohnmacht, C. et al. Basophils orchestrate chronic allergic dermatitis and protective immunity against helminths. Immunity 33, 364–374 (2010).

    Article  CAS  PubMed  Google Scholar 

  74. Herbst, T. et al. Antibodies and IL-3 support helminth-induced basophil expansion. Proc. Natl. Acad. Sci. USA 109, 14954–14959 (2012).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  75. Obata-Ninomiya, K. et al. The skin is an important bulwark of acquired immunity against intestinal helminths. J. Exp. Med. 210, 2583–2595 (2013).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  76. Kang, Y.H. & Biswas, S.K. Basophil-macrophage dialog in allergic inflammation. Immunity 38, 408–410 (2013).

    Article  CAS  PubMed  Google Scholar 

  77. Leung, D.Y. et al. Presence of IgE antibodies to staphylococcal exotoxins on the skin of patients with atopic dermatitis. Evidence for a new group of allergens. J. Clin. Invest. 92, 1374–1380 (1993).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  78. Yousefi, S. et al. Basophils exhibit antibacterial activity through extracellular trap formation. Allergy 70, 1184–1188 (2015).

    Article  CAS  PubMed  Google Scholar 

  79. Gessner, A., Mohrs, K. & Mohrs, M. Mast cells, basophils, and eosinophils acquire constitutive IL-4 and IL-13 transcripts during lineage differentiation that are sufficient for rapid cytokine production. J. Immunol. 174, 1063–1072 (2005).

    Article  CAS  PubMed  Google Scholar 

  80. Qiu, Y. et al. Eosinophils and type 2 cytokine signaling in macrophages orchestrate development of functional beige fat. Cell 157, 1292–1308 (2014).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  81. Wu, D. et al. Eosinophils sustain adipose alternatively activated macrophages associated with glucose homeostasis. Science 332, 243–247 (2011).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  82. Urban, J.F. Jr. et al. Stat6 signaling promotes protective immunity against Trichinella spiralis through a mast cell- and T cell-dependent mechanism. J. Immunol. 164, 2046–2052 (2000).

    Article  CAS  PubMed  Google Scholar 

  83. Hepworth, M.R. et al. Mast cells orchestrate type 2 immunity to helminths through regulation of tissue-derived cytokines. Proc. Natl. Acad. Sci. USA 109, 6644–6649 (2012).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  84. Sandig, H. & Bulfone-Paus, S. TLR signaling in mast cells: common and unique features. Front. Immunol. 3, 185 (2012).

    Article  PubMed  PubMed Central  Google Scholar 

  85. Hogan, S.P., Waddell, A. & Fulkerson, P.C. Eosinophils in infection and intestinal immunity. Curr. Opin. Gastroenterol. 29, 7–14 (2013).

    Article  PubMed  PubMed Central  Google Scholar 

  86. Svensson, L. & Wennerås, C. Human eosinophils selectively recognize and become activated by bacteria belonging to different taxonomic groups. Microbes Infect. 7, 720–728 (2005).

    Article  CAS  PubMed  Google Scholar 

  87. Ketavarapu, J.M. et al. Mast cells inhibit intramacrophage Francisella tularensis replication via contact and secreted products including IL-4. Proc. Natl. Acad. Sci. USA 105, 9313–9318 (2008).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  88. Moro, K. et al. Innate production of TH2 cytokines by adipose tissue-associated c-Kit+Sca-1+ lymphoid cells. Nature 463, 540–544 (2010).

    Article  CAS  PubMed  Google Scholar 

  89. Price, A.E. et al. Systemically dispersed innate IL-13-expressing cells in type 2 immunity. Proc. Natl. Acad. Sci. USA 107, 11489–11494 (2010).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  90. Neill, D.R. et al. Nuocytes represent a new innate effector leukocyte that mediates type-2 immunity. Nature 464, 1367–1370 (2010).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  91. Eberl, G., Colonna, M., Di Santo, J.P. & McKenzie, A.N. Innate lymphoid cells. Innate lymphoid cells: a new paradigm in immunology. Science 348, aaa6566 (2015).

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  92. Bouchery, T. et al. ILC2s and T cells cooperate to ensure maintenance of M2 macrophages for lung immunity against hookworms. Nat. Commun. 6, 6970 (2015).

    Article  CAS  PubMed  Google Scholar 

  93. Besnard, A.G. et al. IL-33-mediated protection against experimental cerebral malaria is linked to induction of type 2 innate lymphoid cells, M2 macrophages and regulatory T cells. PLoS Pathog. 11, e1004607 (2015).

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  94. Arase, H., Mocarski, E.S., Campbell, A.E., Hill, A.B. & Lanier, L.L. Direct recognition of cytomegalovirus by activating and inhibitory NK cell receptors. Science 296, 1323–1326 (2002).

    Article  CAS  PubMed  Google Scholar 

  95. Newman, K.C. & Riley, E.M. Whatever turns you on: accessory-cell-dependent activation of NK cells by pathogens. Nat. Rev. Immunol. 7, 279–291 (2007).

    Article  CAS  PubMed  Google Scholar 

  96. Riise, R.E. et al. TLR-stimulated neutrophils instruct NK cells to trigger dendritic cell maturation and promote adaptive T cell responses. J. Immunol. 195, 1121–1128 (2015).

    Article  CAS  PubMed  Google Scholar 

  97. Jaeger, B.N. et al. Neutrophil depletion impairs natural killer cell maturation, function, and homeostasis. J. Exp. Med. 209, 565–580 (2012).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  98. Bär, E., Whitney, P.G., Moor, K., Reis e Sousa, C. & LeibundGut-Landmann, S. IL-17 regulates systemic fungal immunity by controlling the functional competence of NK cells. Immunity 40, 117–127 (2014).

    Article  CAS  PubMed  Google Scholar 

  99. Jenkins, M.R. et al. Failed CTL/NK cell killing and cytokine hypersecretion are directly linked through prolonged synapse time. J. Exp. Med. 212, 307–317 (2015).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  100. Perona-Wright, G. et al. Systemic but not local infections elicit immunosuppressive IL-10 production by natural killer cells. Cell Host Microbe 6, 503–512 (2009).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  101. Robinette, M.L. et al. Immunological Genome Consortium. Transcriptional programs define molecular characteristics of innate lymphoid cell classes and subsets. Nat. Immunol. 16, 306–317 (2015).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  102. Seo, S.U. et al. Intestinal macrophages arising from CCR2+ monocytes control pathogen infection by activating innate lymphoid cells. Nat. Commun. 6, 8010 (2015).

    Article  CAS  PubMed  Google Scholar 

  103. Chen, L. et al. IL-23 activates innate lymphoid cells to promote neonatal intestinal pathology. Mucosal Immunol. 8, 390–402 (2015).

    Article  CAS  PubMed  Google Scholar 

  104. Mortha, A. et al. Microbiota-dependent crosstalk between macrophages and ILC3 promotes intestinal homeostasis. Science 343, 1249288 (2014).

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  105. Gasteiger, G. & Rudensky, A.Y. Interactions between innate and adaptive lymphocytes. Nat. Rev. Immunol. 14, 631–639 (2014).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  106. Guarda, G. et al. T cells dampen innate immune responses through inhibition of NLRP1 and NLRP3 inflammasomes. Nature 460, 269–273 (2009).

    Article  CAS  PubMed  Google Scholar 

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Acknowledgements

Supported by the US National Institutes of Health (R01AI114647-01A1 and R21CA167238-01A1 to A.R.; K22 AI110573-01 and 1R01AI123224 to M.C.S.; R01AI083405 to G.S.Y.; and 1R01AI107588 to W.C.G.) and the Amelior Foundation (Gause laboratory).

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Rivera, A., Siracusa, M., Yap, G. et al. Innate cell communication kick-starts pathogen-specific immunity. Nat Immunol 17, 356–363 (2016). https://doi.org/10.1038/ni.3375

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