Supplementary Figure 2: Quality measures of proteome data set.
From: Social network architecture of human immune cells unveiled by quantitative proteomics
(a) Left: Number of identified protein groups for each cell type. Total identification is displayed in black, solely MS/MS based identification is displayed in grey (NOT: steady state, ACT: activated). Right: Percent transferred identifications from other MS/MS measurements.
(b) Sequence coverage, unique peptides and protein score for all identified protein group.
(c) Pearson correlation coefficients between cell types replicates.
(d) Comparison of protein identifications for individual cell lineages and relative coverage of relevant immune processes. Reference datasets are indicated.
(e) Pearson correlation coefficients of all total proteome measurements. Samples are arranged according to their lineage relationship.
(f) Heat map of protein markers used for cell sorting. Gene names are indicated in parentheses.
