Supplementary Figure 6: Full list of TFs identified by PageRank and comparison of PageRank with TFA.
From: Epigenetic landscapes reveal transcription factors that regulate CD8+ T cell differentiation
(a) Heatmap showing PageRank fold enrichment of TFs across CD8+ T cell subsets. (b) A list of TFs revealed by PageRank analysis and motif enrichment in Figure 3. Known TFs important for CD8+ T cell differentiation are highlighted in red. (c) Heatmap showing Z score of PageRank score and TFA score of TFs across CD8+ T cell subsets generated by PageRank and TFA analysis, respectively. (d) Bar graph showing the percentage of known TFs with consistent roles in previous reports for each analysis. (e) Bar graphs showing the fold change of YY1 and Nr3c1 gene expression generated from microarray. Data in (e) are the mean value of gene expression from three independent experiments with pooled spleens from three mice.
