Supplementary Figure 1: moFF workflow overview
From: moFF: a robust and automated approach to extract peptide ion intensities
The optional match-between-runs module takes as input a list of features of interest for a given run, and then matches the corresponding features in other runs. Upon matching, all peptides (either identified directly, or indirectly by matching between runs) are processed by the Apex intensity module to extract feature intensity and associated quality measures. The results are then written to tab-delimited output files
