Careful benchmarking improves software methods for analyzing data-independent-acquisition mass spectrometry data.
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References
Navarro, P. et al. A multicenter study benchmarks software tools for label-free protein quantification. Nat. Biotechnol. 34, 1130–1136 (2016).
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Jarchum, I. Proteome quantification compared. Nat Methods 13, 972 (2016). https://doi.org/10.1038/nmeth.4096
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DOI: https://doi.org/10.1038/nmeth.4096