Figure 2: Binning results for the CAMI data sets.
From: Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software
(a) ARI in relation to the fraction of the sample assigned (in bp) by the genome binners. The ARI was calculated excluding unassigned sequences and thus reflects the assignment accuracy for the portion of the data assigned. (b) Number of genomes recovered with varying completeness and contamination (1-purity). (c,d) Average purity (precision) and completeness (recall) for genomes reconstructed by genome binners for genomes of unique strains with ANI <95% to others (c) and common strains with ANI ≥95% to each other (d). For each program and complexity data set (Supplementary Table 2), the submission with the largest sum of purity and completeness is shown. In each case, small bins adding up to 1% of the data set size were removed. Error bars, s.e.m. (e,f) Taxonomic binning performance metrics across ranks for the medium-complexity data set, with results for the complete data set (e) and smallest predicted bins summing up to 1% of the data set (f) removed. Shaded areas, s.e.m. in precision (purity) and recall (completeness) across taxon bins.
