Supplementary Figure 7: Characterization of mutations called from variant calling pipelines.
From: Response to “Unexpected mutations after CRISPR–Cas9 editing in vivo”
Left: Pie chart showing the fraction of dbSNP variants called by the GATK pipeline that have the same genotype in F03 and F05 (but not in FVB). Right: Variants called by the Schaefer et al. pipeline were mapped to the closest dbSNP variant. This pie chart shows the fraction of these dbSNP variants that had the same genotype in F03 and F05. The variants that are closest to calls from the Schaefer et al. pipeline are significantly enriched for variants whose genotype is shared between F03 and F05.
