Abstract
Protein–protein interactions are a crucial element in cellular function. The wealth of information currently available on intracellular-signaling pathways has led many to appreciate the untapped pool of potential drug targets that reside downstream of the commonly targeted receptors. Over the last two decades, there has been significant interest in developing therapeutics and chemical probes that inhibit specific protein–protein interactions. Although it has been a challenge to develop small molecules that are capable of occluding the large, often relatively featureless protein–protein interaction interface, there are increasing numbers of examples of small molecules that function in this manner with reasonable potency. This article will highlight the current progress in the development of small molecule protein–protein interaction inhibitors that have applications in the treatment or study of central nervous system function and disease. In particular, we will focus upon recent work towards developing small molecule inhibitors of amyloid-β and α-synuclein aggregation, inhibitors of critical components of G-protein-signaling pathways, and PDZ domain inhibitors.
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References
Aisen PS (2005). The development of anti-amyloid therapy for Alzheimer's disease: from secretase modulators to polymerisation inhibitors. CNS Drugs 19: 989–996.
Aisen PS, Gauthier S, Vellas B, Briand R, Saumier D, Laurin J et al (2007). Alzhemed: a potential treatment for Alzheimer's disease. Curr Alzheimer Res 4: 473–478.
Amer DA, Irvine GB, El-Agnaf OM (2006). Inhibitors of alpha-synuclein oligomerization and toxicity: a future therapeutic strategy for Parkinson's disease and related disorders. Exp Brain Res 173: 223–233.
Arkin MR, Wells JA (2004). Small-molecule inhibitors of protein–protein interactions: progressing towards the dream. Nat Rev Drug Discov 3: 301–317.
Bakker SC, Hoogendoorn ML, Hendriks J, Verzijlbergen K, Caron S, Verduijn W et al (2007). The PIP5K2A and RGS4 genes are differentially associated with deficit and non-deficit schizophrenia. Genes Brain Behav 6: 113–119.
Berman DM, Kozasa T, Gilman AG (1996). The GTPase-activating protein RGS4 stabilizes the transition state for nucleotide hydrolysis. J Biol Chem 271: 27209–27212.
Bernstein LS, Ramineni S, Hague C, Cladman W, Chidiac P, Levey AI et al (2004). RGS2 binds directly and selectively to the M1 muscarinic acetylcholine receptor third intracellular loop to modulate Gq/11alpha signaling. J Biol Chem 279: 21248–21256.
Bilen J, Bonini NM (2005). Drosophila as a model for human neurodegenerative diseases. Annu Rev Genet 39: 153–171.
Bodenstein J, Sunahara RK, Neubig RR (2007). N-terminal residues control proteasomal degradation of RGS2, RGS4, and RGS5 in human embryonic kidney 293 cells. Mol Pharmacol 71: 1040–1050.
Bodles AM, El-Agnaf OM, Greer B, Guthrie DJ, Irvine GB (2004). Inhibition of fibril formation and toxicity of a fragment of alpha-synuclein by an N-methylated peptide analogue. Neurosci Lett 359: 89–93.
Bogan AA, Thorn KS (1998). Anatomy of hot spots in protein interfaces. J Mol Biol 280: 1–9. This paper describes the “hot spot” theory in protein-protein interactions.
Bolognesi ML, Andrisano V, Bartolini M, Banzi R, Melchiorre C (2005). Propidium-based polyamine ligands as potent inhibitors of acetylcholinesterase and acetylcholinesterase-induced amyloid-beta aggregation. J Med Chem 48: 24–27.
Bonacci TM, Mathews JL, Yuan C, Lehmann DM, Malik S, Wu D et al (2006). Differential targeting of Gbetagamma-subunit signaling with small molecules. Science 312: 443–446. This paper outlines the development of small molecule Gβγ inhibitors. It shows a complete development pathway from virtual screening based on protein structure to in vivo data demonstrating analgesic actions upon i.c.v. administration. It also reveals the capability of small molecule inhibitors to selectively disrupt specific signaling outputs from a protein messenger.
Bowden NA, Scott RJ, Tooney PA (2007). Altered expression of regulator of G-protein signalling 4 (RGS4) mRNA in the superior temporal gyrus in schizophrenia. Schizophr Res 89: 165–168.
Bragin V, Chemodanova M, Dzhafarova N, Bragin I, Czerniawski JL, Aliev G (2005). Integrated treatment approach improves cognitive function in demented and clinically depressed patients. Am J Alzheimers Dis Other Demen 20: 21–26.
Brunton LL, Lazo JS, Parker KL (eds) (2006). Goodman & Gilman's: The Pharmacological Basis of Therapeutics. McGraw-Hill Companies, Inc: New York.
Burchett SA (2005). Psychostimulants, madness, memory … and RGS proteins? Neuromolecular Med 7: 101–127.
Campbell DB, Ebert PJ, Skelly T, Stroup TS, Lieberman J, Levitt P et al (2008). Ethnic stratification of the association of RGS4 variants with antipsychotic treatment response in schizophrenia. Biol Psychiatry 63: 32–41.
Capsoni S, Cattaneo A (2006). On the molecular basis linking Nerve Growth Factor (NGF) to Alzheimer's disease. Cell Mol Neurobiol 26: 619–633.
Capsoni S, Ugolini G, Comparini A, Ruberti F, Berardi N, Cattaneo A (2000). Alzheimer-like neurodegeneration in aged antinerve growth factor transgenic mice. Proc Natl Acad Sci USA 97: 6826–6831.
Cardone RA, Bellizzi A, Busco G, Weinman EJ, Dell’Aquila ME, Casavola V et al (2007). The NHERF1 PDZ2 domain regulates PKA-RhoA-p38-mediated NHE1 activation and invasion in breast tumor cells. Mol Biol Cell 18: 1768–1780.
Cavalli A, Bolognesi ML, Capsoni S, Andrisano V, Bartolini M, Margotti E et al (2007). A small molecule targeting the multifactorial nature of Alzheimer's disease. Angew Chem Int Ed Engl 46: 3689–3692. This article describes the effects of memoquin in the treatment of Alzheimer's disease.
Cavalli A, Bolognesi ML, Minarini A, Rosini M, Tumiatti V, Recanatini M et al (2008). Multi-target-directed ligands to combat neurodegenerative diseases. J Med Chem 51: 347–372.
Chen X, Longgood JC, Michnoff C, Wei S, Frantz DE, Bezprozvanny L (2007). High-throughput screen for small molecule inhibitors of Mint1-PDZ domains. Assay Drug Dev Technol 5: 769–783.
Chowdari KV, Bamne M, Wood J, Talkowski ME, Mirnics K, Levitt P et al (2008). Linkage disequilibrium patterns and functional analysis of RGS4 polymorphisms in relation to schizophrenia. Schizophr Bull 34: 118–126.
Chowdari KV, Mirnics K, Semwal P, Wood J, Lawrence E, Bhatia T et al (2002). Association and linkage analyses of RGS4 polymorphisms in schizophrenia. Hum Mol Genet 11: 1373–1380.
Clark MJ, Harrison C, Zhong H, Neubig RR, Traynor JR (2003). Endogenous RGS protein action modulates mu-opioid signaling through Galphao. Effects on adenylyl cyclase, extracellular signal-regulated kinases, and intracellular calcium pathways. J Biol Chem 278: 9418–9425.
Collins MO, Grant SG (2007). Supramolecular signalling complexes in the nervous system. Subcell Biochem 43: 185–207.
Conway KA, Rochet JC, Bieganski RM, Lansbury Jr PT (2001). Kinetic stabilization of the alpha-synuclein protofibril by a dopamine-alpha-synuclein adduct. Science 294: 1346–1349. This paper describes a series of of catechol and non-catechol compounds that inhibit α-synuclein aggregation.
Darnell SJ, LeGault L, Mitchell JC (2008). KFC Server: interactive forecasting of protein interaction hot spots. Nucleic Acids Res 36 (Web Server issue): W265–W269.
Dev KK, van der Putten H, Sommer B, Rovelli G (2003). Part I: parkin-associated proteins and Parkinson's disease. Neuropharmacology 45: 1–13.
Dickson DW, Rogers J (1992). Neuroimmunology of Alzheimer's disease: a conference report. Neurobiol Aging 13: 793–798.
Doupnik CA, Xu T, Shinaman JM (2001). Profile of RGS expression in single rat atrial myocytes. Biochim Biophys Acta 1522: 97–107.
Duda JE, Lee VM, Trojanowski JQ (2000). Neuropathology of synuclein aggregates. J Neurosci Res 61: 121–127.
El-Agnaf OM, Paleologou KE, Greer B, Abogrein AM, King JE, Salem SA et al (2004). A strategy for designing inhibitors of alpha-synuclein aggregation and toxicity as a novel treatment for Parkinson's disease and related disorders. FASEB J 18: 1315–1317.
Elbaz A, Tranchant C (2007). Epidemiologic studies of environmental exposures in Parkinson's disease. J Neurol Sci 262: 37–44.
Feany MB (2004). New genetic insights into Parkinson's disease. N Engl J Med 351: 1937–1940.
Fischer TB, Arunachalam KV, Bailey D, Mangual V, Bakhru S, Russo R et al (2003). The binding interface database (BID): a compilation of amino acid hot spots in protein interfaces. Bioinformatics 19: 1453–1454.
Fotouhi N, Graves B (2005). Small molecule inhibitors of p53/MDM2 interaction. Curr Top Med Chem 5: 159–165.
Fu Y, Huang X, Zhong H, Mortensen RM, D’Alecy LG, Neubig RR (2006). Endogenous RGS proteins and Galpha subtypes differentially control muscarinic and adenosine-mediated chronotropic effects. Circ Res 98: 659–666.
Fu Y, Zhong H, Nanamori M, Mortensen RM, Huang X, Lan K et al (2004). RGS-insensitive G-protein mutations to study the role of endogenous RGS proteins. Methods Enzymol 389: 229–243.
Fujii N, Haresco JJ, Novak KA, Gage RM, Pedemonte N, Stokoe D et al (2007a). Rational design of a nonpeptide general chemical scaffold for reversible inhibition of PDZ domain interactions. Bioorg Med Chem Lett 17: 549–552.
Fujii N, Haresco JJ, Novak KA, Stokoe D, Kuntz ID, Guy RK (2003). A selective irreversible inhibitor targeting a PDZ protein interaction domain. J Am Chem Soc 125: 12074–12075. This paper, and subsequent papers by Fujii, et al. , provide an example of a rationally developed series of PDZ domain inhibitors.
Fujii N, Shelat A, Hall RA, Guy RK (2007b). Design of a selective chemical probe for class I PDZ domains. Bioorg Med Chem Lett 17: 546–548.
Fujii N, You L, Xu Z, Uematsu K, Shan J, He B et al (2007c). An antagonist of dishevelled protein–protein interaction suppresses beta-catenin-dependent tumor cell growth. Cancer Res 67: 573–579.
Garner CC, Nash J, Huganir RL (2000). PDZ domains in synapse assembly and signalling. Trends Cell Biol 10: 274–280.
Garzon J, Rodriguez-Munoz M, Lopez-Fando A, Garcia-Espana A, Sanchez-Blazquez P (2004). RGSZ1 and GAIP regulate mu- but not delta-opioid receptors in mouse CNS: role in tachyphylaxis and acute tolerance. Neuropsychopharmacology 29: 1091–1104.
Gestwicki JE, Crabtree GR, Graef IA (2004). Harnessing chaperones to generate small-molecule inhibitors of amyloid beta aggregation. Science 306: 865–869. This article provides a novel approach to modulating protein-protein interactions that takes advantage of intracellular proteins to improve the activity of the small molecule.
Gestwicki JE, Marinec PS (2007). Chemical control over protein–protein interactions: beyond inhibitors. Comb Chem High Throughput Screen 10: 667–675.
Giasson BI, Lee VM-Y, Trojanowski JQ (2004). Animal models of neurodegenerative dementing disorders other than Alzheimer's disease. Clin Neurosci Res 3: 427–436.
Glaser F, Pupko T, Paz I, Bell RE, Bechor-Shental D, Martz E et al (2003). ConSurf: identification of functional regions in proteins by surface-mapping of phylogenetic information. Bioinformatics 19: 163–164.
Grafstein-Dunn E, Young KH, Cockett MI, Khawaja XZ (2001). Regional distribution of regulators of G-protein signaling (RGS) 1, 2, 13, 14, 16, and GAIP messenger ribonucleic acids by in situ hybridization in rat brain. Brain Res Mol Brain Res 88: 113–123.
Gu Z, Jiang Q, Yan Z (2007). RGS4 modulates serotonin signaling in prefrontal cortex and links to serotonin dysfunction in a rat model of schizophrenia. Mol Pharmacol 71: 1030–1039.
Guo S, Tang W, Shi Y, Huang K, Xi Z, Xu Y et al (2006). RGS4 polymorphisms and risk of schizophrenia: an association study in Han Chinese plus meta-analysis. Neurosci Lett 406: 122–127.
Hague C, Bernstein LS, Ramineni S, Chen Z, Minneman KP, Hepler JR (2005). Selective inhibition of alpha1A-adrenergic receptor signaling by RGS2 association with the receptor third intracellular loop. J Biol Chem 280: 27289–27295.
Hajduk PJ, Burns DJ (2002). Integration of NMR and high-throughput screening. Comb Chem High Throughput Screen 5: 613–621.
Hammond MC, Harris BZ, Lim WA, Bartlett PA (2006). Beta strand peptidomimetics as potent PDZ domain ligands. Chem Biol 13: 1247–1251.
Hébert L (2007). Neurochem Announces Results from Tramiprosate (ALZHEMED(TM)) North American Phase III Clinical Trial. Neurochem Inc..
Heiser V, Engemann S, Brocker W, Dunkel I, Boeddrich A, Waelter S et al (2002). Identification of benzothiazoles as potential polyglutamine aggregation inhibitors of Huntington's disease by using an automated filter retardation assay. Proc Natl Acad Sci USA 99 (Suppl 4): 16400–16406.
Heiser V, Scherzinger E, Boeddrich A, Nordhoff E, Lurz R, Schugardt N et al (2000). Inhibition of huntingtin fibrillogenesis by specific antibodies and small molecules: implications for Huntington's disease therapy. Proc Natl Acad Sci USA 97: 6739–6744.
Hollinger S, Hepler JR (2002). Cellular regulation of RGS proteins: modulators and integrators of G protein signaling. Pharmacol Rev 54: 527–559.
Huang X, Charbeneau RA, Fu Y, Kaur K, Gerin I, MacDougald OA et al (2008). Resistance to diet-induced obesity and improved insulin sensitivity in mice with a regulator of G protein signaling-insensitive G184S Gnai2 allele. Diabetes 57: 77–85.
Huang X, Fu Y, Charbeneau RA, Saunders TL, Taylor DK, Hankenson KD et al (2006). Pleiotropic phenotype of a genomic knock-in of an RGS-insensitive G184S Gnai2 allele. Mol Cell Biol 26: 6870–6879.
Ishiguro H, Horiuchi Y, Koga M, Inada T, Iwata N, Ozaki N et al (2007). RGS4 is not a susceptibility gene for schizophrenia in Japanese: association study in a large case–control population. Schizophr Res 89: 161–164.
Ishii M, Fujita S, Yamada M, Hosaka Y, Kurachi Y (2005a). Phosphatidylinositol 3,4,5-trisphosphate and Ca2+/calmodulin competitively bind to the regulators of G-protein-signalling (RGS) domain of RGS4 and reciprocally regulate its action. Biochem J 385 (Part 1): 65–73.
Ishii M, Ikushima M, Kurachi Y (2005b). In vivo interaction between RGS4 and calmodulin visualized with FRET techniques: possible involvement of lipid raft. Biochem Biophys Res Commun 338: 839–846.
Iwata A, Maruyama M, Akagi T, Hashikawa T, Kanazawa I, Tsuji S et al (2003). Alpha-synuclein degradation by serine protease neurosin: implication for pathogenesis of synucleinopathies. Hum Mol Genet 12: 2625–2635.
Jelen F, Oleksy A, Smietana K, Otlewski J (2003). PDZ domains—common players in the cell signaling. Acta Biochim Pol 50: 985–1017.
Jin Y, Zhong H, Omnaas JR, Neubig RR, Mosberg HI (2004). Structure-based design, synthesis, and activity of peptide inhibitors of RGS4 GAP activity. Methods Enzymol 389: 266–277.
Johnston TH, Brotchie JM (2004). Drugs in development for Parkinson's disease. Curr Opin Investig Drugs 5: 720–726.
Johnston TH, Brotchie JM (2006). Drugs in development for Parkinson's disease: an update. Curr Opin Investig Drugs 7: 25–32.
Kennedy MB (1998). Signal transduction molecules at the glutamatergic postsynaptic membrane. Brain Res Brain Res Rev 26: 243–257.
Kimple AJ, Willard FS, Giguere PM, Johnston CA, Mocanu V, Siderovski DP (2007). The RGS protein inhibitor CCG-4986 is a covalent modifier of the RGS4 Galpha-interaction face. Biochim Biophys Acta 1774: 1213–1220.
Kortemme T, Kim DE, Baker D (2004). Computational alanine scanning of protein–protein interfaces. Sci STKE 2004: pl2.
Kreimann EL, Morales FC, de Orbeta-Cruz J, Takahashi Y, Adams H, Liu TJ et al (2007). Cortical stabilization of beta-catenin contributes to NHERF1/EBP50 tumor suppressor function. Oncogene 26: 5290–5299.
Lamprecht G, Seidler U (2006). The emerging role of PDZ adapter proteins for regulation of intestinal ion transport. Am J Physiol Gastrointest Liver Physiol 291: G766–G777.
Lan KL, Sarvazyan NA, Taussig R, Mackenzie RG, DiBello PR, Dohlman HG et al (1998). A point mutation in Galphao and Galphai1 blocks interaction with regulator of G protein signaling proteins. J Biol Chem 273: 12794–12797.
Landau M, Mayrose I, Rosenberg Y, Glaser F, Martz E, Pupko T et al (2005). ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures. Nucleic Acids Res 33 (Web Server issue): W299–W302.
Lane HY, Liu YC, Huang CL, Chang YC, Wu PL, Huang CH et al (2008). RGS4 polymorphisms predict clinical manifestations and responses to risperidone treatment in patients with schizophrenia. J Clin Psychopharmacol 28: 64–68.
Lang UE, Puls I, Muller DJ, Strutz-Seebohm N, Gallinat J (2007). Molecular mechanisms of schizophrenia. Cell Physiol Biochem 20: 687–702.
Lansbury PT, Lashuel HA (2006). A century-old debate on protein aggregation and neurodegeneration enters the clinic. Nature 443: 774–779.
Laurie NA, Schin-Shih C, Dyer MA (2007). Targeting MDM2 and MDMX in retinoblastoma. Curr Cancer Drug Targets 7: 689–695.
Lee VM, Trojanowski JQ (2006). Mechanisms of Parkinson's disease linked to pathological alpha-synuclein: new targets for drug discovery. Neuron 52: 33–38.
Lehmann DM, Seneviratne AM, Smrcka AV (2008). Small molecule disruption of G protein beta gamma subunit signaling inhibits neutrophil chemotaxis and inflammation. Mol Pharmacol 73: 410–418.
Levitt P, Ebert P, Mirnics K, Nimgaonkar VL, Lewis DA (2006). Making the case for a candidate vulnerability gene in schizophrenia: convergent evidence for regulator of G-protein signaling 4 (RGS4). Biol Psychiatry 60: 534–537.
Li D, He L (2006). Association study of the G-protein signaling 4 (RGS4) and proline dehydrogenase (PRODH) genes with schizophrenia: a meta-analysis. Eur J Hum Genet 14: 1130–1135.
Li J, Zhu M, Manning-Bog AB, Di Monte DA, Fink AL (2004a). Dopamine and L-dopa disaggregate amyloid fibrils: implications for Parkinson's and Alzheimer's disease. FASEB J 18: 962–964.
Li J, Zhu M, Rajamani S, Uversky VN, Fink AL (2004b). Rifampicin inhibits alpha-synuclein fibrillation and disaggregates fibrils. Chem Biol 11: 1513–1521.
Mayasundari A, Ferreira AM, He L, Mahindroo N, Bashford D, Fujii N (2008). Rational design of the first small-molecule antagonists of NHERF1/EBP50 PDZ domains. Bioorg Med Chem Lett 18: 942–945.
Melchiorre C, Andrisano V, Bolognesi ML, Budriesi R, Cavalli A, Cavrini V et al (1998). Acetylcholinesterase noncovalent inhibitors based on a polyamine backbone for potential use against Alzheimer's disease. J Med Chem 41: 4186–4189.
Mirnics K, Middleton FA, Stanwood GD, Lewis DA, Levitt P (2001). Disease-specific changes in regulator of G-protein signaling 4 (RGS4) expression in schizophrenia. Mol Psychiatry 6: 293–301.
Morris DW, Rodgers A, McGhee KA, Schwaiger S, Scully P, Quinn J et al (2004). Confirming RGS4 as a susceptibility gene for schizophrenia. Am J Med Genet B Neuropsychiatr Genet 125B: 50–53.
Morrison RS, Kinoshita Y, Johnson MD, Ghatan S, Ho JT, Garden G (2002). Neuronal survival and cell death signaling pathways. Adv Exp Med Biol 513: 41–86.
Nagano T, Jourdi H, Nawa H (1998). Emerging roles of Dlg-like PDZ proteins in the organization of the NMDA-type glutamatergic synapse. J Biochem 124: 869–875.
Natochin M, Granovsky AE, Artemyev NO (1997). Regulation of transducin GTPase activity by human retinal RGS. J Biol Chem 272: 17444–17449.
Necula M, Chirita CN, Kuret J (2005). Cyanine dye N744 inhibits tau fibrillization by blocking filament extension: implications for the treatment of tauopathic neurodegenerative diseases. Biochemistry 44: 10227–10237.
Necula M, Kayed R, Milton S, Glabe CG (2007). Small molecule inhibitors of aggregation indicate that amyloid beta oligomerization and fibrillization pathways are independent and distinct. J Biol Chem 282: 10311–10324.
Nekrasova ER, Berman DM, Rustandi RR, Hamm HE, Gilman AG, Arshavsky VY (1997). Activation of transducin guanosine triphosphatase by two proteins of the RGS family. Biochemistry 36: 7638–7643.
Neubig RR (2002). Regulators of G protein signaling (RGS proteins): novel central nervous system drug targets. J Pept Res 60: 312–316.
Neubig RR, Siderovski DP (2002). Regulators of G-protein signalling as new central nervous system drug targets. Nat Rev Drug Discov 1: 187–197.
Nicodemus KK, Kolachana BS, Vakkalanka R, Straub RE, Giegling I, Egan MF et al (2007). Evidence for statistical epistasis between catechol-O-methyltransferase (COMT) and polymorphisms in RGS4, G72 (DAOA), GRM3, and DISC1: influence on risk of schizophrenia. Hum Genet 120: 889–906.
Nicodemus KK, Marenco S, Batten AJ, Vakkalanka R, Egan MF, Straub RE et al (2008). Serious obstetric complications interact with hypoxia-regulated/vascular-expression genes to influence schizophrenia risk. Mol Psychiatry 13: 873–877.
Norris EH, Giasson BI, Hodara R, Xu S, Trojanowski JQ, Ischiropoulos H et al (2005). Reversible inhibition of alpha-synuclein fibrillization by dopaminochrome-mediated conformational alterations. J Biol Chem 280: 21212–21219.
Norris EH, Giasson BI, Lee VM (2004). Alpha-synuclein: normal function and role in neurodegenerative diseases. Curr Top Dev Biol 60: 17–54.
Nunn C, Mao H, Chidiac P, Albert PR (2006). RGS17/RGSZ2 and the RZ/A family of regulators of G-protein signaling. Semin Cell Dev Biol 17: 390–399.
O’Brien RJ, Lau LF, Huganir RL (1998). Molecular mechanisms of glutamate receptor clustering at excitatory synapses. Curr Opin Neurobiol 8: 364–369.
O’Tuathaigh CM, Babovic D, O’Meara G, Clifford JJ, Croke DT, Waddington JL (2007). Susceptibility genes for schizophrenia: characterisation of mutant mouse models at the level of phenotypic behaviour. Neurosci Biobehav Rev 31: 60–78.
Ono K, Hasegawa K, Naiki H, Yamada M (2005). Preformed beta-amyloid fibrils are destabilized by coenzyme Q10 in vitro. Biochem Biophys Res Commun 330: 111–116.
Pagliaro L, Felding J, Audouze K, Nielsen SJ, Terry RB, Krog-Jensen C et al (2004). Emerging classes of protein–protein interaction inhibitors and new tools for their development. Curr Opin Chem Biol 8: 442–449.
Pan Y, Wang L, Dai JL (2006). Suppression of breast cancer cell growth by Na+/H+ exchanger regulatory factor 1 (NHERF1). Breast Cancer Res 8: R63.
Piazzi L, Rampa A, Bisi A, Gobbi S, Belluti F, Cavalli A et al (2003). 3-(4-[[Benzyl(methyl)amino]methyl]phenyl)-6, 7-dimethoxy-2H-2-chromenone (AP2238) inhibits both acetylcholinesterase and acetylcholinesterase-induced beta-amyloid aggregation: a dual function lead for Alzheimer's disease therapy. J Med Chem 46: 2279–2282.
Planas AM, Gorina R, Chamorro A (2006). Signalling pathways mediating inflammatory responses in brain ischaemia. Biochem Soc Trans 34 (Part 6): 1267–1270.
Popov SG, Krishna UM, Falck JR, Wilkie TM (2000). Ca2+/Calmodulin reverses phosphatidylinositol 3,4,5-trisphosphate-dependent inhibition of regulators of G protein-signaling GTPase-activating protein activity. J Biol Chem 275: 18962–18968.
Porat Y, Abramowitz A, Gazit E (2006). Inhibition of amyloid fibril formation by polyphenols: structural similarity and aromatic interactions as a common inhibition mechanism. Chem Biol Drug Des 67: 27–37.
Redies C (1997). Cadherins and the formation of neural circuitry in the vertebrate CNS. Cell Tissue Res 290: 405–413.
Riddle EL, Schwartzman RA, Bond M, Insel PA (2005). Multi-tasking RGS proteins in the heart: the next therapeutic target? Circ Res 96: 401–411.
Rochet JC, Outeiro TF, Conway KA, Ding TT, Volles MJ, Lashuel HA et al (2004). Interactions among alpha-synuclein, dopamine, and biomembranes: some clues for understanding neurodegeneration in Parkinson's disease. J Mol Neurosci 23: 23–34.
Roman DL, Talbot JN, Roof RA, Sunahara RK, Traynor JR, Neubig RR (2007). Identification of small-molecule inhibitors of RGS4 using a high-throughput flow cytometry protein interaction assay. Mol Pharmacol 71: 169–175. This paper details the development of CCG-4986, the first small molecule inhibitor of an RGS protein.
Roof RA, Jin Y, Roman DL, Sunahara RK, Ishii M, Mosberg HI et al (2006). Mechanism of action and structural requirements of constrained peptide inhibitors of RGS proteins. Chem Biol Drug Des 67: 266–274.
Roof RA, Sobczyk-Kojiro K, Turbiak AJ, Roman DL, Pogozheva ID, Blazer LL et al (2008). Novel peptide ligands of RGS4 from a focused one-bead, one-compound library. Chem Biol Drug Des 72: 111–119.
Rosini M, Andrisano V, Bartolini M, Bolognesi ML, Hrelia P, Minarini A et al (2005). Rational approach to discover multipotent anti-Alzheimer drugs. J Med Chem 48: 360–363.
Sanders AR, Duan J, Levinson DF, Shi J, He D, Hou C et al (2008). No significant association of 14 candidate genes with schizophrenia in a large European ancestry sample: implications for psychiatric genetics. Am J Psychiatry 165: 497–506.
Sarek G, Ojala PM (2007). p53 reactivation kills KSHV lymphomas efficiently in vitro and in vivo: new hope for treating aggressive viral lymphomas. Cell Cycle 6: 2205–2209.
Sarrouilhe D, di Tommaso A, Metaye T, Ladeveze V (2006). Spinophilin: from partners to functions. Biochimie 88: 1099–1113.
Savitt JM, Dawson VL, Dawson TM (2006). Diagnosis and treatment of Parkinson disease: molecules to medicine. J Clin Invest 116: 1744–1754.
Scott JK, Huang SF, Gangadhar BP, Samoriski GM, Clapp P, Gross RA et al (2001). Evidence that a protein–protein interaction ‘hot spot’ on heterotrimeric G protein betagamma subunits is used for recognition of a subclass of effectors. EMBO J 20: 767–776.
Shan J, Shi DL, Wang J, Zheng J (2005). Identification of a specific inhibitor of the dishevelled PDZ domain. Biochemistry 44: 15495–15503.
Shenolikar S, Weinman EJ (2001). NHERF: targeting and trafficking membrane proteins. Am J Physiol Renal Physiol 280: F389–F395.
Shibata T, Chuma M, Kokubu A, Sakamoto M, Hirohashi S (2003). EBP50, a beta-catenin-associating protein, enhances Wnt signaling and is over-expressed in hepatocellular carcinoma. Hepatology 38: 178–186.
Shulman-Peleg A, Shatsky M, Nussinov R, Wolfson HJ (2008). MultiBind and MAPPIS: webservers for multiple alignment of protein 3D-binding sites and their interactions. Nucleic Acids Res 36 (Web Server issue): W260–W264.
Siderovski DP, Willard FS (2005). The GAPs, GEFs, and GDIs of heterotrimeric G-protein alpha subunits. Int J Biol Sci 1: 51–66.
Skovronsky DM, Lee VM, Trojanowski JQ (2006). Neurodegenerative diseases: new concepts of pathogenesis and their therapeutic implications. Annu Rev Pathol 1: 151–170.
Slep KC, Kercher MA, He W, Cowan CW, Wensel TG, Sigler PB (2001). Structural determinants for regulation of phosphodiesterase by a G protein at 2.0 A. Nature 409: 1071–1077.
Smrcka AV, Lehmann DM, Dessal AL (2008). G Protein betagamma subunits as targets for small molecule therapeutic development. Comb Chem High Throughput Screen 11: 382–395.
So HC, Chen RY, Chen EY, Cheung EF, Li T, Sham PC (2008). An association study of RGS4 polymorphisms with clinical phenotypes of schizophrenia in a Chinese population. Am J Med Genet B Neuropsychiatr Genet 147B: 77–85.
Sutrala SR, Norton N, Williams NM, Buckland PR (2007). Gene copy number variation in schizophrenia. Am J Med Genet B Neuropsychiatr Genet 147B: 606–611.
Talkowski ME, Seltman H, Bassett AS, Brzustowicz LM, Chen X, Chowdari KV et al (2006). Evaluation of a susceptibility gene for schizophrenia: genotype based meta-analysis of RGS4 polymorphisms from thirteen independent samples. Biol Psychiatry 60: 152–162.
Tesmer JJ, Berman DM, Gilman AG, Sprang SR (1997). Structure of RGS4 bound to AlF4—activated G(i alpha1): stabilization of the transition state for GTP hydrolysis. Cell 89: 251–261.
Thorn KS, Bogan AA (2001). ASEdb: a database of alanine mutations and their effects on the free energy of binding in protein interactions. Bioinformatics 17: 284–285.
Tomiyama T, Asano S, Suwa Y, Morita T, Kataoka K, Mori H et al (1994). Rifampicin prevents the aggregation and neurotoxicity of amyloid beta protein in vitro. Biochem Biophys Res Commun 204: 76–83.
Tomiyama T, Shoji A, Kataoka K, Suwa Y, Asano S, Kaneko H et al (1996). Inhibition of amyloid beta protein aggregation and neurotoxicity by rifampicin. Its possible function as a hydroxyl radical scavenger. J Biol Chem 271: 6839–6844.
Tosetti P (2004). Evaluating chick Galpha-interacting protein selectivity. Methods Enzymol 390: 3–17.
Traxler P, Bold G, Buchdunger E, Caravatti G, Furet P, Manley P et al (2001). Tyrosine kinase inhibitors: from rational design to clinical trials. Med Res Rev 21: 499–512.
Traynor JR, Neubig RR (2005). Regulators of G protein signaling & drugs of abuse. Mol Interv 5: 30–41.
Vilella E, Costas J, Sanjuan J, Guitart M, De Diego Y, Carracedo A et al (2008). Association of schizophrenia with DTNBP1 but not with DAO, DAOA, NRG1 and RGS4 nor their genetic interaction. J Psychiatr Res 42: 278–288.
Voltz JW, Weinman EJ, Shenolikar S (2001). Expanding the role of NHERF, a PDZ-domain containing protein adapter, to growth regulation. Oncogene 20: 6309–6314.
Wang Y, Lee Y, Zhang J, Young KH (2008). Identification of Peptides That Inhibit Regulator of G Protein Signaling 4 Function. Pharmacology 82: 97–104.
Weintraub D, Comella CL, Horn S (2008). Parkinson's disease—part 1: pathophysiology, symptoms, burden, diagnosis, and assessment. Am J Manag Care 14 (2 Suppl): S40–S48.
Wells JA (1991). Systematic mutational analyses of protein–protein interfaces. Methods Enzymol 202: 390–411. This is one of the seminal papers on alanine scanning, a technique that led to the appreciation of protein-protein interaction “hot spots.”
Whitty A, Kumaravel G (2006). Between a rock and a hard place? Nat Chem Biol 2: 112–118.
Wieland T, Chen CK, Simon MI (1997). The retinal specific protein RGS-r competes with the gamma subunit of cGMP phosphodiesterase for the alpha subunit of transducin and facilitates signal termination. J Biol Chem 272: 8853–8856.
Williams NM, Preece A, Spurlock G, Norton N, Williams HJ, McCreadie RG et al (2004). Support for RGS4 as a susceptibility gene for schizophrenia. Biol Psychiatry 55: 192–195.
Wood LS, Pickering EH, Dechairo BM (2007). Significant support for DAO as a schizophrenia susceptibility locus: examination of five genes putatively associated with schizophrenia. Biol Psychiatry 61: 1195–1199.
Woulfe DS, Stadel JM (1999). Structural basis for the selectivity of the RGS protein, GAIP, for Galphai family members. Identification of a single amino acid determinant for selective interaction of Galphai subunits with GAIP. J Biol Chem 274: 17718–17724.
Wright TM (2006). Tramiprosate. Drugs Today (Barc) 42: 291–298.
Xie W, Samoriski GM, McLaughlin JP, Romoser VA, Smrcka A, Hinkle PM et al (1999). Genetic alteration of phospholipase C beta3 expression modulates behavioral and cellular responses to mu opioids. Proc Natl Acad Sci USA 96: 10385–10390.
Zhong H, Neubig RR (2001). Regulator of G protein signaling proteins: novel multifunctional drug targets. J Pharmacol Exp Ther 297: 837–845.
Zhong H, Wade SM, Woolf PJ, Linderman JJ, Traynor JR, Neubig RR (2003). A spatial focusing model for G protein signals. Regulator of G protein signaling (RGS) protien-mediated kinetic scaffolding. J Biol Chem 278: 7278–7284.
Zhu M, Rajamani S, Kaylor J, Han S, Zhou F, Fink AL (2004). The flavonoid baicalein inhibits fibrillation of alpha-synuclein and disaggregates existing fibrils. J Biol Chem 279: 26846–26857.
Acknowledgements
This study was supported by NIH R01GM39561 and NIH RO1DA23252 to RRN and by a fellowship awarded to LLB by the CBI Training Program T32-GM008597.
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Dr Neubig has received a gift of equipment and research supplies from Luminex Corporation, consulting fees from Berlex/Bayer, and lecture fees from Glaxo-Smith-Kline, Abbott Laboratories, Merck Research Labs, and Epix Pharmaceuticals. Levi Blazer has no conflicts to disclose.
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Blazer, L., Neubig, R. Small Molecule Protein–Protein Interaction Inhibitors as CNS Therapeutic Agents: Current Progress and Future Hurdles. Neuropsychopharmacol 34, 126–141 (2009). https://doi.org/10.1038/npp.2008.151
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DOI: https://doi.org/10.1038/npp.2008.151
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