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Collaborative platforms for streamlining workflows in Open Science
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  • Published: 27 June 2011

Collaborative platforms for streamlining workflows in Open Science

  • Konrad Förstner1,2,
  • Gregor Hagedorn3,
  • Claudia Koltzenburg4,
  • M. Fabiana Kubke5 &
  • …
  • Daniel Mietchen6 

Nature Precedings (2011)Cite this article

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Abstract

Despite the internet’s dynamic and collaborative nature, scientists continue to produce grant proposals, lab notebooks, data files, conclusions etc. that stay in static formats or are not published online and therefore not always easily accessible to the interested public. Because of limited adoption of tools that seamlessly integrate all aspects of a research project (conception, data generation, data evaluation, peer-reviewing and publishing of conclusions), much effort is later spent on reproducing or reformatting individual entities before they can be repurposed independently or as parts of articles.We propose that workflows - performed both individually and collaboratively - could potentially become more efficient if all steps of the research cycle were coherently represented online and the underlying data were formatted, annotated and licensed for reuse. Such a system would accelerate the process of taking projects from conception to publication stages and allow for continuous updating of the data sets and their interpretation as well as their integration into other independent projects.A major advantage of such workflows is the increased transparency, both with respect to the scientific process as to the contribution of each participant. The latter point is important from a perspective of motivation, as it enables the allocation of reputation, which creates incentives for scientists to contribute to projects. Such workflow platforms offering possibilities to fine-tune the accessibility of their content could gradually pave the path from the current static mode of research presentation into a more coherent practice of open science.

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Authors and Affiliations

  1. Institute for Molecular Infection Biology, University of Würzburg, Germany

    Konrad Förstner

  2. Research Centre for Infectious Diseases, University of Würzburg, Germany

    Konrad Förstner

  3. Julius Kühn-Institute, Federal Research Center for Cultivated Plants, Berlin, Germany

    Gregor Hagedorn

  4. Cellular Therapy and Transplantation (CTT) https://www.nature.com/nature

    Claudia Koltzenburg

  5. Department of Anatomy with Radiology, University of Auckland https://www.nature.com/nature

    M. Fabiana Kubke

  6. Science 3.0 https://www.nature.com/nature

    Daniel Mietchen

Authors
  1. Konrad Förstner
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  2. Gregor Hagedorn
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  3. Claudia Koltzenburg
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  4. M. Fabiana Kubke
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  5. Daniel Mietchen
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Corresponding author

Correspondence to Konrad Förstner.

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Förstner, K., Hagedorn, G., Koltzenburg, C. et al. Collaborative platforms for streamlining workflows in Open Science. Nat Prec (2011). https://doi.org/10.1038/npre.2011.6066.1

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  • Received: 27 June 2011

  • Accepted: 27 June 2011

  • Published: 27 June 2011

  • DOI: https://doi.org/10.1038/npre.2011.6066.1

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Keywords

  • Virtual Research Environments
  • collaboratories
  • workflow platform
  • automation
  • transparency
  • reproducibitliy
  • reputation
  • funding
  • open science
  • Open Hardware
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