Table 2 Representative virus-based treatment strategies for CoV infections

From: Coronaviruses — drug discovery and therapeutic options

Targeted viral components

Examples

Mechanism of action

Status

Comments

Refs

Viral nucleic acids

Nucleosides and/or nucleotides

Mycophenolic acid

Inhibitor of IMPDH and guanine monophosphate synthesis

Marketed

• Broad spectrum: MERS-CoV, HBV, HCV, arboviruses (JEV, WNV, YFV, dengue virus and CHIKV)

• Worsened outcome in MERS-CoV-infected common marmosets

• Unlikely to be useful as monotherapy, but combinatorial therapy with interferon beta-1b is synergistic in vitro

122,128,192

mRNA

Ribozyme

An antisense RNA with catalytic activity that specifically recognizes the base sequence GUC in the loop region on the mRNA of CoVs

Preclinical

• Narrow spectrum

• Optimal delivery method in humans is uncertain

131

Host cell membrane-bound viral replication complex

K22

Inhibitor of membrane-bound RNA synthesis and double membrane vesicle formation

Preclinical

• Broad spectrum: SARS-CoV, MERS-CoV, HCoV-229E and animal CoVs

• No animal or human data available

112

Long viral dsRNA

DRACO

A chimeric protein with a viral dsRNA-binding domain and a pro-apoptotic domain that selectively induces apoptosis in cells containing viral dsRNA

Preclinical

• Broad spectrum: adenoviruses, arenaviruses, bunyaviruses, dengue virus, IAV, picornaviruses, rhinoviruses and reoviruses

• Anti-CoV activity has yet to be demonstrated

132

Viral enzymes

PLpro

GRL0617, compound 4

Inhibitors of PLpro activity

Preclinical

• Narrow spectrum

• No animal or human data available

137,138,139,140

3CLpro

Lopinavir, N3, CE-5 and GRL-001

Inhibitors of 3CLpro activity

Preclinical

• Broad spectrum: SARS-CoV, MERS-CoV, HCoV-229E, HCoV-NL63 and animal CoVs

• Marketed: lopinavir–ritonavir

• Improved outcome of MERS-CoV-infected common marmosets

• Improved outcome of SARS patients in non-randomized trials

76,77,123,128,143,144,145,146,275,276

RdRp

Ribavirin

Guanosine analogue that inhibits viral RNA synthesis and mRNA capping

Marketed

• Broad spectrum: many viral infections, especially SARS, MERS, RSV, HCV and viral haemorrhagic fevers

• Active against SARS-CoV and MERS-CoV at high doses in vitro

• Benefits in SARS and MERS patients are uncertain

• Side effects are common and may be severe with high-dose reigmens

10,21,86,87,88,89,117,277,278,279,280

BCX4430

Adenosine analogue that acts as a non-obligate RNA chain terminator to inhibit viral RNA polymerase function

Preclinical

• Broad spectrum: SARS-CoV, MERS-CoV, IAV, filoviruses, togaviruses, bunyaviruses, arenaviruses, paramyxoviruses, picornaviruses and flaviviruses

• No animal or human data are available for CoVs

149

Fleximer nucleoside analogues of acyclovir

Doubly flexible nucleoside analogues based on the acyclic sugar scaffold of acyclovir and the flex-base moiety in fleximers that inhibit RdRp

Preclinical

• Active against MERS-CoV and HCoV-NL63

• Further modification of existing nucleoside analogues with different fleximers is possible

• No animal or human data available

150

siRNA*

Short chains of dsRNA that interfere with the expression of RdRp

Preclinical

• Narrow spectrum

• Optimal delivery method in humans is uncertain

151,152

Helicase

Bananins and 5-hydroxychromone derivatives

Inhibits helicase unwinding and ATPase activities

Preclinical

• Possibly broad spectrum: helicase is relatively conserved among CoVs

• High risk of toxicity

153,154

SSYA10-001 and ADKs

Inhibits helicase unwinding without affecting ATPase activity

Preclinical

• Broad spectrum: SARS-CoV, MERS-CoV and animal CoVs

• Likely to be less toxic than bananins and 5-hydroxychromone derivatives

155,156,281

Viral spike glycoprotein

RBD of the S1 subunit of S

MERS-4, MERS-27, m336, m337, m338, REGN3051 and REGN3048 mAbs

mAbs against the RBD of the S1 subunit that block virus–host cell binding

Preclinical

• Narrow spectrum

• May reduce the need for convalescent-phase plasma therapy

• Protective effects demonstrated in animal models

94,95,96,97,100,160,161,162

S2 subunit of S

HR2P and P1 peptides

Antiviral peptides that inhibit fusion of S with host cell receptor

Preclinical

• Narrow spectrum

• Enfuvirtide, an anti-HIV antiviral peptide fusion inhibitor, has been successfully marketed

92,93,99,160,161,162

Oligosaccharides on S

Griffithsin

A carbohydrate-binding agent that specifically binds to oligosaccharides on S, thereby blocking virus–host cell binding

Preclinical

• Broad spectrum: SARS-CoV, MERS-CoV, HCoV-229E, HCoV-OC43, HIV, HCV and Ebola virus

• Well tolerated in rodents

173,174

S expression

siRNA*

Short chains of dsRNA that interfere with the expression of SARS-CoV S

Preclinical

• Narrow spectrum

• SARS-CoV-infected rhesus macaques had better clinical, virological, and histological parameters

• Optimal delivery method in humans is uncertain

169,170,171,172

Viral envelope, membrane, nucleocapsid and accessory proteins

E

siRNA*

Short chains of dsRNA that interfere with the expression of SARS-CoV E

Preclinical

• Narrow spectrum

• Optimal delivery method in humans is uncertain

179

Hexamethylene amiloride

Viroporin inhibitor that inhibits the ion channel activity of CoV E

Preclinical

• Inhibited ion channel activities of SARS-CoV, HCoV-229E and some animal CoVs

• Analogue of the potassium-sparing diuretic drug amiloride

181,182

M

siRNA*

Short chains of dsRNA that interfere with the expression of SARS-CoV M

Preclinical

• Narrow spectrum

• Optimal delivery method in humans is uncertain

179

N

PJ34, intrabodies and siRNA*

Reduces the RNA-binding affinity of N and viral replication

Preclinical

• Narrow spectrum

• Optimal delivery method in humans is uncertain

179,183,282

Accessory proteins

siRNA*

Short chains of dsRNA that interfere with the expression of proteins from SARS-CoV ORF3a, ORF7a and ORF7b

Preclinical

• Narrow spectrum

• Optimal delivery method in humans is uncertain

180

Lipid membrane

LJ001 and JL103

Membrane-binding photosensitizers that induce singlet oxygen modifications of specific phospholipids

Preclinical

• Broad spectrum: enveloped viruses (IAV, filoviruses, poxviruses, arenaviruses, bunyaviruses, paramyxoviruses, flaviviruses and HIV-1)

• Anti-CoV activity has yet to be demonstrated

184,185,186,187

  1. 3CLpro, 3C-like protease; ADK, aryl diketoacid; CHIKV, Chikungunya virus; CoV, coronavirus; DRACO, double-stranded RNA activated caspase oligomerizer; dsRNA, double-stranded RNA; E, envelope protein; HBV, hepatitis B virus; HCoV, human coronavirus; HCV, hepatitis C virus; IAV, influenza A virus; IMPDH, inosine-monophosphate dehydrogenase; JEV, Japanese encephalitis virus; M, membrane protein; mAb, monoclonal antibody; MERS, Middle East respiratory syndrome; N, nucleocapsid protein; ORF, open reading frame; PLpro, papain-like protease; RBD, receptor-binding domain; RdRp, RNA-dependent RNA polymerase; RSV, respiratory syncytial virus; S, spike glycoprotein; SARS, severe acute respiratory syndrome; siRNA, small interfering RNA; WNV, West Nile virus; YFV, yellow fever virus.
  2. *Only siRNAs that have been evaluated in published reports are included. siRNAs directed against other parts of the CoV genome would also be expected to diminish the accumulation or translation of genomic and upstream subgenomic RNAs.
  3. Intrabodies are antibodies that work within the cell to bind to intracellular proteins.
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