Table 1 Summary of analyzed TCGA cancer types and data sets

From: Analysis of microRNA-target interactions across diverse cancer types

Cancer type

Description

Samples

miRNAs

mRNAs

GBM

Glioblastoma multiforme

380

446

17,805

OVA

Ovarian serous cystadenocarcinoma

509

589

17,805

CRCb

Colon and rectum adenocarcinoma

181

347

15,855

KIRC

Kidney renal clear-cell carcinoma

368

376

18,213

LUSC

Lung squamous-cell carcinoma

195

439

18,135

BRCA

Breast invasive carcinoma

671

419

18,099

UCEC

Uterine corpus endometrioid carcinoma

247

498

15,897

BLCA

Bladder urothelial carcinoma

94

507

15,377

HNSC

Head and neck squamous-cell carcinoma

298

463

15,140

LUAD

Lung adenocarcinoma

347

472

15,455

Total

 

3,290

429a

16,190a

  1. amiRNAs and mRNAs expressed in at least five cancer types.
  2. bData sets for TCGA colon (COAD) and rectum adenocarcinoma (READ) were merged in the analysis, and the merged data set is listed as CRC.
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