Table 1 Number of all and infrequent (<0.01) alleles
From: Efficient HLA imputation from sequential SNPs data by transformer
HLA | Pan Asian | T1DGC | Mixed panel | |||
---|---|---|---|---|---|---|
All alleles | Infrequent alleles | All alleles | Infrequent alleles | All alleles | Infrequent alleles | |
A | 26 | 7 | 50 | 34 | 39 | 22 |
C | 24 | 9 | 33 | 15 | 32 | 14 |
B | 48 | 20 | 97 | 74 | 72 | 44 |
DRB1 | 32 | 11 | 51 | 33 | 48 | 28 |
DQA1 | 8 | 0 | 8 | 1 | 8 | 0 |
DQB1 | 15 | 1 | 18 | 5 | 18 | 3 |
DPA1 | 5 | 1 | 7 | 4 | 7 | 3 |
DPB1 | 21 | 6 | 34 | 20 | 27 | 16 |